Dokdonia sp. 4H-3-7-5: Krodi_1924
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Entry
Krodi_1924 CDS
T01484
Name
(GenBank) protein-export membrane protein SecD
KO
K12257
SecD/SecF fusion protein
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi02024
Quorum sensing
kdi03060
Protein export
kdi03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Krodi_1924
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Krodi_1924
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Krodi_1924
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
kdi02044
]
Krodi_1924
Secretion system [BR:
kdi02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Krodi_1924
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
MMPL
Sec_GG
ACR_tran
DUF5518
Motif
Other DBs
NCBI-ProteinID:
AEE19907
UniProt:
F4B306
LinkDB
All DBs
Position
complement(2172082..2175063)
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AA seq
993 aa
AA seq
DB search
MQNKGLIRFFAIIFGLVCLYQLSFTYFTNKTEDEAKAYAISQAPEDADMQDVVERAYLDS
IGANPIFAGITYNDAKEKELNKGLDLKGGINVILQISIRDILGGLSNNSTDPAFIAALDA
TDEAQKDSQNTYFEDFVSAFEAQGGQLASPDIFANVILNEKVDTGMSNTEVASVLEAEIK
ETIGSAFETLRNRIDKFGVTQPNIQSLGDNGRILVELPGAKDIDRVRGLLEKTAQLEFYQ
THYAGDALNYLIGANETLRGLVASNEEKQEAAVAQDSTLDDNVSDLLKDADEEEAEQDFG
PLFKIFSPNQQAVQNSTIPTVGFAAVKDTATINSYLRNPSVVKQRPASLRYAKFAWGVPE
EGADIVALYALESNRQGAPYMDGDVVNDSRQQFTQTQQPAVGLDFEGQGVNQWAKMTREV
AQKGNAIAIALDGNVYSAASARQEIKGGATEISGNFTVAAAQDLATVLNAGRLPASAKII
QAEEIGPSLGKEAIDSGILSFLIALALVLVWMVFYYGKAGGFADIALVVNILFIFGVLAG
LGAVLTLPGIAGIVLTIGMSVDANVLIFERIKEELRKGKSQKDAIKDGFNNALSSILDAN
ITTFLTALILFLFGTGPVQGFATTLMIGIATSLFCAIFITRLFIDGYGKNGKSLEFATSM
TKGLFVNNSIDFLGKRKIAYAISGVLIVGGLAALLTGGLDTGIDFVGGRTYTVRFDQPMN
AQEVEDALVADFGSADVKTFGADNQLKITTKYRIDETGTDIDAQVEQQLFTSLTPYLPTG
MTYAAFAKSTDDKQVGKMEYYMVGPTIADDIKKGALFAVIGSLIVVFLYILLRFRRWQFS
LGAVAAVFHDVLLVLGVFAVLKNIMPFDMEVDQNFIAAILTVIGYSLNDTVVVFDRIREY
IKEHGSTRGFGKLINQALNSTLSRTLNTSVTTLIVLLAIFFLGAPSIRGLMFALIVGVIV
GTYSSLFIATPVMFDTVQKKGLKEEKEEEEVEA
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacaaaggactcattagattttttgcgataatttttggtctggtatgtttatac
caactatcatttacgtatttcacaaacaaaacagaagacgaagctaaggcttacgcgatc
tctcaagcaccagaagatgcagatatgcaggatgtggtggagcgcgcatacttagatagt
ataggagcaaatcctatttttgctggtatcacttataatgatgctaaggaaaaagaactt
aacaaaggactggatcttaaaggaggtattaacgtaatccttcagatctctattcgtgat
atcttaggtggtctttctaacaatagtacagatccagctttcatagctgcattagatgct
acagatgaggcacaaaaagatagccagaacacatacttcgaagatttcgtatctgcattt
gaagcgcaaggaggacaactagcgtctccagatatctttgcaaacgtaattcttaacgaa
aaagtagatacaggaatgagcaacacagaggttgctagtgttcttgaagcggaaatcaaa
gaaacaataggttctgcttttgaaacgttacgtaatcgtattgataagtttggagtaaca
caacctaacatccagtctctaggagataatgggcgtattcttgttgagcttccaggagct
aaagatattgatcgtgtaagaggtcttcttgaaaagacagcacaattagagttctaccaa
actcactatgctggagacgcacttaactacttaataggagcaaatgaaacactacgcgga
cttgttgctagcaacgaggagaagcaagaagctgcagtagctcaagacagtacccttgat
gataatgtatctgatttacttaaagatgcagatgaggaagaggcagaacaagattttgga
ccacttttcaaaatatttagtcctaaccaacaagcggttcaaaatagcacaattccaact
gtaggatttgctgctgtaaaagatacagcaactattaactcgtacttgagaaacccgtct
gttgtaaagcagcgtccagcatctttacgttatgcaaaatttgcatggggtgtaccagaa
gaaggagcagatatcgtagcactttatgcacttgaatctaacagacaaggagcaccatac
atggacggtgacgttgtcaacgactcacgccagcaatttacacaaacacaacaaccagca
gtaggtcttgattttgaaggacaaggtgtaaatcagtgggcaaaaatgactcgcgaagtt
gcacaaaaaggaaacgctattgctattgcactagatggtaatgtatactctgcagcatca
gctcgtcaagagattaaaggtggtgcgacagaaatctctggaaactttacagtagctgcg
gcacaagatcttgcaacagtattgaatgctggtagacttcctgcatctgcaaagattatt
caagcagaagaaattggaccatcactaggtaaagaagcgattgattctggaattttatcg
ttccttatcgcactagcattagtattagtatggatggtattttactacggtaaagctggt
ggatttgcagatattgctcttgtagtaaacatccttttcatctttggagtacttgccggt
ctgggagctgtacttacacttcctggtattgcaggtatcgtacttactataggtatgtct
gtggatgcaaacgtacttatctttgaacgtattaaagaagagctacgtaaagggaagtct
caaaaagatgcgattaaagatggttttaacaacgcactttcttctattcttgatgcaaac
atcactaccttcttaacggcacttatccttttcttatttggaacaggaccagtacaagga
tttgcaactacacttatgataggtattgcaacttcattattctgtgcaattttcattact
cgtctattcattgatggatacgggaagaatggaaaatcacttgagtttgctacatctatg
actaaaggtctttttgtaaacaacagtatcgatttcttaggaaaacgtaaaattgcttat
gctatctctggtgtacttatcgtaggtggacttgctgctttacttactggtggtcttgat
actggtattgactttgtaggaggtcgtacgtatacagttcgttttgatcaacctatgaat
gcacaagaagtagaagatgcactagttgcagattttggaagtgcagatgtaaaaacattt
ggagcagataatcaattaaagattacgacaaagtaccgtatcgatgagacaggtacagat
attgacgctcaggttgagcaacaattatttacttcacttactccttacttacctactgga
atgacgtatgcagcatttgcaaagtctacagatgataagcaggtaggaaaaatggagtac
tacatggtaggacctaccattgcagatgatattaagaaaggtgcactttttgcagttatc
ggatcactaatcgtggtattcttatacatcttattacgtttccgtagatggcaattctct
cttggagctgtagctgcagttttccatgatgttttgttagtactaggagtatttgcagtc
ttgaaaaacattatgccatttgatatggaggtagatcaaaactttattgcggctattctt
accgtaattgggtactctctgaatgataccgtggtagtttttgaccgtatacgtgagtat
attaaagagcacggttctactagaggatttggtaaattaattaaccaagcacttaacagt
acattgagtcgtacacttaatacgtctgtaactacgttaatcgtacttctagcgatcttc
ttcttaggagctccatctattagaggattaatgtttgcacttattgtaggtgtaatcgta
ggtacatattcttcactatttatcgcaactcctgtaatgtttgacacagtacagaagaaa
ggattaaaggaagaaaaagaagaggaagaagtagaagcataa
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