Dokdonia sp. 4H-3-7-5: Krodi_2022
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Entry
Krodi_2022 CDS
T01484
Name
(GenBank) putative two component, sigma54 specific, transcriptional regulator, Fis family
Organism
kdi
Dokdonia sp. 4H-3-7-5
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
AAA
AAA_16
Mg_chelatase
AAA_3
bpMoxR
AAA_7
AAA_2
Sa_NUDIX
TetR_C_36
Motif
Other DBs
NCBI-ProteinID:
AEE20005
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Position
2273683..2274846
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AA seq
387 aa
AA seq
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MAKILIIEDEAAIRRVLTKILSEESKDYQVEEAADGLEGINKIREEDYDLVLCDIKMPKM
DGVEVLEAARKLKPETPMVMISGHGDLDTAVNTMRLGAFDYISKPPDLNRLLNTVRNALD
RKTLVVENIQLKKKVSKKYEMVGKSKEIDQIKEMIEKVAPTDARVLITGPNGTGKELVAH
WLHEKSDRAKGALIEVNCAAIPSELIESELFGHVKGAFTSANKDRAGKFEAANGGTIFLD
EIGDMSLSAQAKVLRALQESRVQRVGSDKDIKVDVRVVAATNKNLKEEIAEGRFREDLYH
RLAVILIKVPALNERRDDIPILIEHFAKKISQEQGTAKKSFSDKAIDLLKAYDWTGNIRE
LRNVVERLIILSGPEVSEGDVKLFASK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagattttaattatagaggatgaggctgcgatacgtcgtgtgcttaccaaaata
ctatcagaagaaagtaaggattaccaagtagaagaagctgcagatggactagaaggtata
aataagatacgcgaggaagattatgacttagtcctttgtgatattaaaatgcctaagatg
gacggagtagaagtacttgaagctgcacgtaagcttaagccagaaactcctatggtaatg
atctcaggacatggtgacctagatactgccgtaaacacgatgcgcctaggggcttttgat
tatatatctaagccgccagaccttaatagattacttaatacggtacgcaacgcactagac
cgtaaaacccttgtcgtagaaaatattcagcttaagaaaaaggtgagtaagaaatacgag
atggtaggtaagagtaaggagatcgatcaaatcaaagaaatgatcgaaaaagtagctcct
acagatgctagagttttgattactggtcctaacggtaccggtaaagagctagtagcacac
tggctgcatgaaaaaagtgatcgtgcaaaaggagcacttatagaggtaaactgtgctgcc
atcccgtcagaacttatagagagcgaactttttggccacgtgaaaggtgcttttactagt
gcaaataaagatcgcgctgggaagtttgaagcggcaaacggtggaactatttttctagat
gaaataggagatatgagtctttctgcacaggccaaagtacttagagctttacaagaaagc
cgtgtacaacgtgtaggtagtgataaagacattaaagtggatgtgcgcgtagtggcggca
actaataagaatctaaaagaagaaatagcagaaggaagatttcgtgaggatttatatcac
aggctagcagtaattttaattaaagtgccagcgctcaatgaacgcagagatgatatccca
attctcatagagcactttgcaaagaaaatctctcaagagcaaggaaccgcaaaaaaatca
ttttcagacaaagctattgatttacttaaagcttatgactggactggaaatatacgtgaa
ctgcgcaatgtagttgaacgacttattatcttaagtggcccagaagtgtcagaaggggat
gtaaaactatttgctagtaaataa
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