Dokdonia sp. 4H-3-7-5: Krodi_2149
Help
Entry
Krodi_2149 CDS
T01484
Name
(GenBank) MiaB-like tRNA modifying enzyme
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kdi03016
]
Krodi_2149
Enzymes [BR:
kdi01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Krodi_2149
Transfer RNA biogenesis [BR:
kdi03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Krodi_2149
Prokaryotic type
Methylthiotransferases
Krodi_2149
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
HIR3_2nd
B12-binding
Motif
Other DBs
NCBI-ProteinID:
AEE20131
LinkDB
All DBs
Position
2429455..2430798
Genome browser
AA seq
447 aa
AA seq
DB search
MSSKKKVAFYTLGCKLNFSETSTIARSFGQEGFDKVEFSEPADVYVINTCSVTENADKRF
KSIVKQAQKVNPEGVTVAVGCYAQLKPEELADVDGVDLVLGATEKFNVTSYINDLLDNPD
RSKEGGEVHACEIQDADFYVSSYSIGDRTRAFLKVQDGCDYKCTYCTIPLARGISRSDTL
QNVLDNASKIAAQDIKEIVLTGVNIGDYGKGEFGNKKHEHTFLELVQELDKVEGIERLRI
SSIEPNLLKNETIDVVSKSRTFVPHFHIPLQSGSNKILGLMRRRYQRELYVDRVAKIKEV
MPQACIGVDVIVGFPGETDEDFLETYNFLTGLDISYLHVFTYSERDNTPAATMEGEVPKK
VRSKRSKMLRGLSAKMRRAFYESQLNSMRTVLFESENKEGYIHGFTENYVKVKSPWNPEL
VNTLHEVELTSIDDDGMVRFDFANVEV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctaaaaagaaagtcgcattttatacactaggttgtaaactgaatttttcagag
actagtaccattgctcgtagttttgggcaagagggatttgataaagttgagttttctgag
cctgcagatgtctacgtgataaatacatgtagtgtgacagaaaatgcagataagcgtttt
aagtctattgtaaaacaagctcaaaaggtaaatccagaaggagttactgtcgcagtaggt
tgttatgcacaacttaaaccagaagagcttgctgatgtagatggtgtagatctcgttctt
ggagcgacagagaagtttaatgtcactagttatattaatgatttactagataatccagat
agatctaaggaaggtggagaagtacacgcttgtgagattcaagatgcagatttctatgtg
agctcttattctataggagatcgaactcgtgcctttttaaaagtgcaagatggttgtgat
tataaatgtacctattgtacgataccccttgctagaggtatttctagaagtgatacatta
caaaatgtattggacaacgcttcaaaaatagctgcgcaagacataaaagagattgtactt
actggagttaatataggagattacggtaaaggagagtttggaaacaagaagcacgagcat
acttttttagaactcgtacaagagcttgataaagtagaaggaatagagcgcttaagaata
tcttctatagagcctaatctacttaaaaatgaaacaattgatgtggtgtctaagtcacgc
acatttgtacctcattttcatatcccattacagagtggaagcaataagattcttgggttg
atgcgtcgccgttatcaacgcgagttatatgtagaccgtgttgccaaaatcaaagaggta
atgcctcaagcttgtataggtgtagacgtaatcgtaggttttccgggagaaacagatgag
gattttctagaaacttataatttccttaccggattagatatctcttacttacatgtcttt
acatattcagaacgtgataatactcctgccgctacgatggaaggagaagtgcctaaaaag
gtgcgtagtaaacgtagtaaaatgctacgaggactttcagccaaaatgcgtagagcattc
tatgagtcccaattaaacagtatgcgcactgtactttttgaaagtgagaataaggaaggc
tacattcacgggtttacagaaaattacgtaaaagtaaaatcaccttggaatccagaactt
gtaaatacattacacgaagtggagctaacttctatagatgatgatggaatggtgagattt
gattttgcaaacgttgaggtgtaa
DBGET
integrated database retrieval system
