Dokdonia sp. 4H-3-7-5: Krodi_2209
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Entry
Krodi_2209 CDS
T01484
Name
(GenBank) periplasmic binding protein
KO
K25034
cobalamin transport system substrate-binding protein
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kdi02000
]
Krodi_2209
Transporters [BR:
kdi02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Cobalamin transporter
Krodi_2209
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Paralog
GFIT
Motif
Pfam:
Peripla_BP_2
DUF6330
FYRC
Motif
Other DBs
NCBI-ProteinID:
AEE20190
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Position
complement(2493818..2494999)
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AA seq
393 aa
AA seq
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MKNTTLFLVGLLSLFISCKEKSKEVKNNESQGISLSIDYANGFSIKQYTNHTIITVTEAF
PGAQKVFKYALIPRDSSGNNTDIELSNTLEETLKSQGVDAILKTPLNTVVVTSTTHIPSL
EMLGVAETLKGFPNLDYISSPLSRKRIANKEIIDLGQNESLNTELTIELRPEAIISFGVE
GENKSLNSVERAGIPVLYNGDWVEKDPLGKAEWIKFFGALYGKEREADSIFNHIKNNYNL
IKEQIAAIENKPTVLSGGMFKDIWYLPKGDSWQAKVLEDAGGNYLWSETEGAGSIALSIE
SVLEKGQQADFWIAPGQYTSYAKLASDNPAYAQFDAFKNKKVYTFAKYKGETGGLLYYEL
APNRPDLVLRDLAKILHPEMITEAFTFFDTLDE
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatactaccctatttctagttggcttgttatcgcttttcatttcatgtaaagag
aaatcaaaagaggttaaaaacaacgaaagccaaggcatttctttgtctatagattatgca
aacggattctctataaaacaatacacaaatcatacaattattacagttacagaagcattt
cctggagcgcaaaaggtgtttaagtatgctctaataccgagagattcttctggaaataat
acagatatagagctgtctaacacactagaagaaacgcttaaatcacaaggtgtagatgca
attctcaaaacgccgttaaacactgttgtcgttacttctacgacacatatcccttcgtta
gaaatgctaggtgttgcagagactttaaaaggttttcctaatcttgattatatttctagt
ccgctttcgcgaaagcgtattgcaaacaaagaaatcattgaccttgggcaaaatgaatct
ctcaatacagaactcactatcgagctgcgcccagaagcaattataagctttggtgtagag
ggagaaaacaagtcgcttaacagtgtagaacgagctggaattcctgtactatataatgga
gattgggtggagaaagacccactaggaaaagcagaatggattaagttttttggcgcactt
tatggcaaggagcgcgaggcagatagcatttttaatcatattaaaaacaactacaatcta
ataaaagagcaaatagccgctatagagaataagcctacagttttaagtggaggcatgttt
aaagatatctggtacttacctaaaggtgacagctggcaagcaaaagtgcttgaagatgct
ggcggtaattacttgtggtctgagaccgagggagctggaagtatcgcactaagtatagaa
tctgtgctagagaaaggacagcaagccgacttctggatagcaccaggacagtacactagt
tatgctaagcttgcgagtgacaatcccgcttatgctcagtttgacgcatttaaaaacaag
aaggtttacacgtttgcaaagtacaaaggagaaactggcggtttgttatattacgagcta
gcgcctaacagacctgatttagtattgcgagatcttgccaaaatcttacatccagaaatg
atcacagaggcatttaccttttttgacacactagatgaataa
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