Dokdonia sp. 4H-3-7-5: Krodi_2329
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Entry
Krodi_2329 CDS
T01484
Name
(GenBank) Excinuclease ABC C subunit domain protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi03030
DNA replication
kdi03430
Mismatch repair
kdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Krodi_2329
03430 Mismatch repair
Krodi_2329
03440 Homologous recombination
Krodi_2329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdi03032
]
Krodi_2329
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_2329
Enzymes [BR:
kdi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Krodi_2329
DNA replication proteins [BR:
kdi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Krodi_2329
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Krodi_2329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
Motif
Other DBs
NCBI-ProteinID:
AEE20307
LinkDB
All DBs
Position
2636499..2637860
Genome browser
AA seq
453 aa
AA seq
DB search
MDFILHFNILRRAFLDLQTNSNNLKIASAIAFSVVVFDDEEELYYHESLIKPLQVLSPDQ
EFTYGITNISLRKAPSFIDIASLLIDNLEDCEIAYFDNFSQQLLRGSFREIGYPLRKSSL
IFNATSSRKSSSAAQLSFAETAAIHSVEYDSLKAGMNARALSQLFQIKASVDDNKSSAFA
KAEQNTIATTSLYDHLPKTSGVYYFRNATDEVIYVGKAVDLKKRVISHFKSRLVFEKTLC
KETVAVEYVETGNELIALLKESAEIKQLAPTYNSQQIETNNPWIVESKIDAKGILRIVPT
EKSYTDSCHTVSFNRDSVIQQLKLLQIMHALCPRFMGVERTAGSCSSKACKGVCRGEEPK
EIYNARVYKALETLTSKEETYYLDLIGRTSNERSFVLVVDGIYMGYGYITNQETVNTIED
LEAYLIPQEHTYYTSRSILTHLKKRGVIKNFLR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
ttggattttatcctacacttcaatatattgagaagagccttcttagatttacaaactaac
agcaataatttaaaaatagcgagcgctattgcattttctgtggtcgtttttgatgatgaa
gaggagttgtattatcatgagagccttatcaaaccgcttcaagtgctttccccagatcag
gaattcacttatgggattactaatatatcactgcgcaaagcaccatcattcatagatatc
gcgagtttactcatcgacaacttggaagactgtgagattgcatattttgataatttctct
cagcaattgctacgcggctcttttagagagattgggtatccactaaggaagtcttccctt
atttttaatgctacttcctccagaaagagtagcagcgctgcacaactatcttttgcggaa
actgcagctattcattcggtggaatatgattctttgaaagctggcatgaatgctcgagca
ctgtctcaattgtttcaaattaaggctagtgtggatgataataagagttccgctttcgcg
aaagcggaacaaaacaccatcgctaccacaagcctatatgaccatttaccgaaaacaagt
ggcgtgtactactttaggaatgcaaccgacgaagtgatttacgtaggaaaagcagtcgac
ttaaaaaagcgagtgatttcgcattttaagagcagattagtttttgaaaagacactgtgc
aaagaaaccgtcgctgtagaatatgttgaaaccggaaacgagttaatcgctttactcaaa
gagtcggcagagataaaacagcttgcacctacctataattcgcaacagatagagaccaac
aacccttggattgtggaatctaaaatagatgccaaaggaatcttgagaattgtacccaca
gaaaagagctacacagactcctgtcataccgtttcttttaatagggattctgtaatccag
caactcaaactattacaaataatgcatgcgctatgtccaagatttatgggtgtagaacgc
actgctggttcttgctctagcaaagcttgtaagggcgtatgtaggggagaagaacccaag
gaaatatacaatgcaagagtatacaaagcgctggaaactctcacgagtaaagaagaaacc
tactacctagacctcatagggagaactagcaacgagcgatcatttgtgcttgtggtagac
gggatttatatgggatatggatatattacaaatcaagagacggtaaataccatagaagat
cttgaggcgtatcttattcctcaagaacatacgtattacaccagccgaagtatcctcaca
cacctcaaaaaacgcggagttattaaaaatttcttaagatag
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