Dokdonia sp. 4H-3-7-5: Krodi_2508
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Entry
Krodi_2508 CDS
T01484
Name
(GenBank) DNA mismatch repair protein MutS domain protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Krodi_2508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_2508
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Krodi_2508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Rad17
COG3_N
MSSS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEE20485
UniProt:
F4B0N2
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All DBs
Position
complement(2830987..2833164)
Genome browser
AA seq
725 aa
AA seq
DB search
MIKITSKTLQDLEFDTVCEQVSERCTTDKGKAKALAIEPYPTPKQAIFGLHQTNEYLSSR
TADAAIPNHGFDSLDHEVKYLAIEDSTLEKGSFKKLSSISETVNIHLKFFKKFEELYPTL
YNTVRETEYTTDIIDTITRIIDKYGEVRDDATPTLGTLRRAINQTKGRINSSFASALGQY
AGYGYLDDIRETIVDNVRVLAVTAMHRRKVKGSIMGSSKTGSITYIQPEATLQAQRELNN
LVFEEDEEVKRILKELTNRMRPYIPLFEEYQELLSDIDLIAAKMKYAEKMNGLLPKITTD
RELTIKEAYHPLLLLSNNAKKEKTYPQDIHLDQGSRIIVISGPNAGGKSITLKTVGLLQL
MLQSGMLIPVHEYSRMCLFDKILTDIGDNQSIENHLSTYSYRLKNMNYFLKKCDKNTLIL
IDEFGTGSDPELGGALAETFLEVFHEREAFGIITTHYANLKMMANETPEIVNANMLFDAR
TLEPLFKLHMGEAGSSFTFEVAQKNGIPYSLINRSKKKVERGKIRFDKSIANLQKERSKL
SKTTSSLKAKELQAAKEKAQLAEINEKVQSKLEAYQELYDSNQRLIYLGTKLDGISKKFY
HDKKKRELVAEFMKIVQIENSKRKKQSAKQAKADKAKELATKKEAEKHVQVIREKKKEAK
KKEPEAMKPKVTLKEGDRVRMFDGKAVGVIDNIEKGKATVDYGMFTTNVSLEQLELVQRK
KKNAK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgataaagatcactagtaaaacattacaagatttagagtttgacaccgtatgtgagcaa
gtctcagagcgctgtactacagacaaaggaaaggcaaaggcgctagctatagagccttac
cctactcctaaacaagcaatttttgggcttcatcaaactaatgaatatctctcttctcgc
actgcagatgccgcgatacctaatcatggttttgatagtcttgatcatgaggtgaagtat
cttgctattgaagatagtaccttagaaaaagggagttttaaaaaactttctagtatttct
gagactgtaaatattcacctcaaattctttaagaaatttgaggagctctaccctacttta
tataatacggtaagagagacagagtatactacagatattattgataccatcacgcgcatt
attgataaatacggcgaggtacgtgatgatgcaacacctacactgggcacattacgtaga
gcaattaaccaaactaaaggacgtattaattcaagttttgctagcgcactaggtcagtac
gctggatatggatatctggacgatatacgagaaactatagtagataatgtgcgcgtgctt
gctgttactgcaatgcacagacgtaaagttaaaggttctattatgggaagctcaaagact
ggaagtattacctacatccagccagaagcgacattgcaggcacaaagagagcttaataac
ttagtttttgaagaagatgaagaggtaaaacgtatactcaaagagcttacaaatagaatg
cgaccttatattccgctttttgaagaatatcaagagttgctcagtgatattgatctgatt
gcggctaaaatgaagtacgccgaaaagatgaatggcttactgcctaaaatcactacagat
cgcgaactcactataaaagaagcctatcatccattattgcttttaagtaataatgctaaa
aaagaaaaaacctacccacaagatattcatctagatcaaggaagccgaattattgtgatt
tctggacctaacgcaggtggaaagagtattacacttaaaaccgtaggattacttcaatta
atgttacaaagtggaatgctcatacctgtacacgagtattcacgcatgtgcttatttgat
aaaatccttacagatataggtgacaaccagagtatagaaaatcacttgagcacctatagt
tatcgccttaagaacatgaattacttcttaaagaagtgcgataaaaacacgcttatcctc
attgacgaatttggtactggatcagatcctgagcttggtggtgcactggcagagacattt
ctagaagtttttcacgagcgcgaggcctttggaattattaccacgcactacgcaaacctc
aagatgatggcaaatgaaacgccagagattgtaaatgcaaatatgctttttgacgcacgc
acgttggagccactttttaaactacatatgggagaagctggtagctcctttacttttgag
gtagcacaaaaaaatggcatcccctactcgcttatcaatcgctcaaagaagaaggtagag
cgtggcaaaatacgttttgacaagagtatcgcaaacctacaaaaggaacgcagcaaactc
tcaaaaactacgagttcgcttaaagcgaaagaactacaagcggcaaaagaaaaagcacag
cttgccgaaataaatgagaaagtacaaagtaagctcgaggcttatcaagaactgtatgat
agcaaccagcgcttgatttatctaggtacaaaactagatggaatcagtaaaaaattctac
cacgataagaaaaaacgcgaactcgtagcagagtttatgaaaatcgtacagatagaaaat
agcaagcgtaaaaaacaaagtgctaagcaagcaaaagctgataaagcaaaagagcttgcc
acaaaaaaagaagcagaaaaacatgtacaagtaatacgcgagaaaaagaaggaggctaag
aaaaaagaacccgaagcaatgaagccaaaggtgactttaaaagaaggagatcgcgtgcgc
atgtttgatgggaaggctgttggtgttattgataacatagaaaaaggtaaagccactgta
gattacggaatgtttactacaaatgtctctctggagcaactagaacttgtacaacgcaag
aagaagaatgcaaaataa
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