Dokdonia sp. 4H-3-7-5: Krodi_2509
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Entry
Krodi_2509 CDS
T01484
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Krodi_2509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_2509
Enzymes [BR:
kdi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Krodi_2509
DNA repair and recombination proteins [BR:
kdi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Krodi_2509
Prokaryotic type
Krodi_2509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AEE20486
UniProt:
F4B0N3
LinkDB
All DBs
Position
2833285..2833950
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AA seq
221 aa
AA seq
DB search
MHVKIEASWKQELKEEFDKPYFKSLTDFVTQEYHTHTCYPPGEEIFSAFDHCPFDKVKVV
IIGQDPYHGAGQANGLCFSVQDGIAHPPSLKNIFKELETDVGIATPASGNLDKWAAQGVL
LLNATLTVRAGEAGSHQKQGWEHFTDVVIDTLSRKRENIIFLLWGGFAKRKGKKIDASKH
FILLSGHPSPLSANRGYWFGNKHFSKVNEILLSKGEAPIEW
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtaaaaatagaagcaagctggaagcaagaactcaaggaagaatttgataagcca
tattttaaatctcttacagattttgtaacacaggagtaccatacacatacctgttatcca
cccggcgaagagatcttttcggcttttgatcattgtccctttgataaggttaaggtggtg
attataggtcaagatccgtatcatggagcagggcaggctaacggattatgtttttctgta
caagatggtattgctcatccaccgtcacttaagaatatatttaaggagctagaaacagat
gtgggaatagctacaccagcttctggaaatcttgataaatgggcagctcaaggggtttta
cttcttaatgcaacgcttacggtacgagcaggtgaggctggatcacatcaaaaacaagga
tgggagcattttacagatgtggtgatagatacgctttcgcgaaagcgtgaaaacattatt
ttcctactttggggaggatttgccaaaaggaaaggaaagaaaatagatgcttcaaaacat
tttatactactctctgggcatccatcaccgctaagtgcaaatcgcggttactggttcggt
aataagcactttagtaaggtaaatgagattttattgagtaaaggagaggctcccattgaa
tggtag
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