Dokdonia sp. 4H-3-7-5: Krodi_2544
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Entry
Krodi_2544 CDS
T01484
Name
(GenBank) beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00061
Fatty acid biosynthesis
kdi00540
Lipopolysaccharide biosynthesis
kdi01100
Metabolic pathways
kdi01212
Fatty acid metabolism
Module
kdi_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Krodi_2544
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Krodi_2544
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kdi01005
]
Krodi_2544
01004 Lipid biosynthesis proteins [BR:
kdi01004
]
Krodi_2544
Enzymes [BR:
kdi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
Krodi_2544
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
Krodi_2544
Lipopolysaccharide biosynthesis proteins [BR:
kdi01005
]
Lipid A
Krodi_2544
Lipid biosynthesis proteins [BR:
kdi01004
]
Fatty acid synthase
Component type
Krodi_2544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
DUF2118
4HBT_2
Motif
Other DBs
NCBI-ProteinID:
AEE20521
UniProt:
F4B0R8
LinkDB
All DBs
Position
2879659..2881065
Genome browser
AA seq
468 aa
AA seq
DB search
MSNAKAQQRTIAKEISLQGVGLHTGADVLMTFKPAPENHGYKFKRLDLEGEPVLNADASL
VTNTQRGTNLERNGVSIQTTEHVLAACVGLEIDNLLIELNASEPPIMDGSSKFFVEALEE
AGVLEQDAVRDEYVVKEIITYLDEESGSEIILMPADEYQVTTMVDFGTKVLGTQNASIQH
ISQFKEEISDSRTFSFLHEIEMLLEHGLIKGGDLNNAIVYVDKELSASTMEKLKVAFNKD
DIAVKPNGILDNLTLHHANEAARHKLLDVIGDLALVGTRIRGKIIANKPGHFINTQFAKK
LQKIIKNERRNYVPDVDLHATPVKDVNQIMEMLPHRPPFLLVDKILELTKEHVIGVKNVT
MNEPFFVGHFPGSPVMPGVLQIEAMAQTGGILVLSTVPDPENYLTYLLKIDKVRYKHQVV
PGDTLIFKLDLMSPIRRGICQMQARAYANGKLVSEAEIMAQIVKVKNL
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgctaaagcacaacaacgtacgatagctaaagaaataagcttacaaggtgta
ggtttgcacacaggtgcagatgtactaatgacctttaagccagctccagaaaaccacggc
tataaatttaaacgccttgatcttgaaggagagccagtactaaatgcagatgcttctctt
gtaaccaatacacaacgaggaacaaaccttgaaagaaacggcgtttctattcaaactaca
gagcacgtacttgctgcttgcgtaggacttgaaatagataaccttcttattgagcttaat
gcttctgagcctcctattatggatggctcttcgaagttttttgtagaagcacttgaagaa
gcaggggttctagaacaggatgctgtacgtgatgaatatgtggtgaaagaaattatcact
tatctagacgaagagtctgggagtgagattattttaatgccggcagatgagtatcaagtt
actactatggtagactttggtactaaagtgctaggtactcagaatgcaagcatacaacac
atatcgcaatttaaggaggaaatttcagatagtagaacatttagttttctacatgagata
gagatgttgcttgagcacggtctcattaaaggtggagatctcaataatgcgattgtatat
gtagataaagaattatctgctagtacaatggaaaaattgaaggtagcctttaataaggat
gatatcgctgtaaagcctaacggcatactagataaccttactctgcaccatgctaatgaa
gcagcacgtcataaactacttgacgttataggagacttagcactagtaggtacaagaata
cgtggtaaaatcattgcaaataagcctggtcactttataaacacacagtttgcaaaaaaa
cttcagaaaattattaagaatgaacgccgtaattatgttccagatgtagatttgcatgcg
acccctgtaaaggacgtaaatcaaataatggagatgttacctcatagacctccattcttg
cttgtagataagattttagagctcacaaaagagcatgtgattggagtgaaaaatgtaaca
atgaatgaaccattctttgtggggcattttcccggatctccggtaatgcctggcgtactt
caaatagaagcaatggctcaaacgggaggtattttagttttaagtaccgttccagatcca
gaaaactatctaacttatttacttaaaatagataaagtaagatataagcatcaggtggta
cctggtgatactcttattttcaaattagacctaatgtcacctatacgtagaggaatctgc
cagatgcaagctcgcgcttatgcaaatggtaaacttgtctcagaagccgaaataatggcg
caaatagtaaaagtaaaaaatctctag
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