Dokdonia sp. 4H-3-7-5: Krodi_2599
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Entry
Krodi_2599 CDS
T01484
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Krodi_2599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_2599
Enzymes [BR:
kdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Krodi_2599
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Krodi_2599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
PriA_C
Zn_ribbon_PriA
Helicase_C
nSTAND3
TrmB
Zn_ribbon_6
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AEE20575
LinkDB
All DBs
Position
2931409..2933865
Genome browser
AA seq
818 aa
AA seq
DB search
MPYFIDVILPIPVENTFTYLVSEAEYNYIQKGMRVAVPFGKKKVYASIVKNKHEQAPTIY
EAKEIQQILDEDPIVTEEQLKFWSWIADYYMCTEGEVMRAALPKAFLLESETVIRLKEDG
LDIDETSLKDDEFLIYEALQHRSELKVHEVMDILDKKKILPSIQRLIDQGVIEMQEEIYE
QYVPKLVKFITIAPAYEGEEGLTTVLEELSRAPKQREMVLTFFSLKAKTNKPISSQDLQK
ASGATASQLKALVDKGVFQTYQKRQDRVGFDGEVFETKVLNEYQQTAYDEIKSHFETKDV
ALLHGVTASGKTEIYVQLIEEMLDSGDQILYLLPEIALTTQLITRLQTYFGERVAIFHSK
YSVNERVEVWNNVLKKLDKAQIIIGARSALLLPFRDLKFIVVDEEHESSFKQYDPAPRYH
ARDAAIVLGAMFKAKVLLGSATPSIETVYNAQQGKYGYVSLKQRHGGILMPEINLVDIKE
KSKKREMTGHFSDTLIRAITDALALGEQVILFQNRRGFSPILECTTCGHAPQCPNCDVSL
TYHKYRSQLRCHYCGYNIALQQKCMACGSAELTTKGFGTEQIELELKELYPDKSIARMDS
DTTRGKYGFEKLITAFEQEQIDILVGTQMLTKGLDFRNVTLVGIMNADSMLNFPDFRAHE
RSYQLIAQVSGRAGRTEKQGKVLVQTYNPYHQILQQVSANKFEEMYKEQLEERRNFKYPP
FHRLIRITLKHRDYQKIEEASIWLAKALRQTLGADTVLGPETPSVARIRNQYRRNVLIKI
SRRQKLLETKKAIKRVVTSFNAIAPYRSVRLVIDVDCY
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atgccttattttatagatgttatacttcctatccctgtagagaatacgtttacgtacctc
gtctctgaggcagagtataactatattcaaaaagggatgcgggttgctgttccttttggt
aaaaagaaagtatatgcttctatcgtaaaaaacaaacatgagcaggcacctaccatttat
gaagccaaggaaatacagcaaattctagatgaggaccctatagtcactgaagagcagctg
aaattctggagttggattgcagattactatatgtgtaccgaaggagaggtcatgcgcgct
gcactccctaaggctttcttactggaaagcgagactgtgataagacttaaggaagatggg
cttgacatagatgagacatcgcttaaggatgatgagtttctcatatatgaagcattacag
catcgttcagaattaaaggttcatgaggtaatggatattcttgataagaaaaaaatccta
ccttctatacagcgtttaattgatcaaggtgtgatcgagatgcaagaagagatttatgag
caatatgtacctaagcttgtaaaatttatcactattgccccagcatacgaaggcgaggag
ggacttacaactgtgctagaggaattatcgcgagctccaaaacaacgagagatggtgctc
acatttttctcgcttaaagcgaaaacaaataaaccaatatcatctcaggacttacaaaaa
gcatctggcgctactgctagtcagctcaaggcactggttgataaaggtgtttttcaaacc
tatcaaaaacgacaggaccgtgtaggttttgacggcgaagtttttgaaacaaaggttctc
aacgaatatcagcagacggcttatgatgaaataaaaagtcattttgaaacaaaagatgtc
gccttgttgcatggagtaactgcttcaggaaagacagaaatatatgtgcagctcatagaa
gagatgcttgattctggtgatcaaatactgtatttacttccggaaatagcacttactacc
cagttaataactaggctacaaacatactttggtgagcgcgtagcgatttttcattctaaa
tactcagtaaatgagcgagtagaggtgtggaataatgtattgaaaaagctagataaagct
caaattattataggggcgcgtagtgctcttttattaccctttagagacttaaaatttatt
gtagtagatgaggagcatgaaagtagtttcaagcaatacgaccctgcaccaagatatcat
gctcgtgatgctgctattgtgctaggtgccatgtttaaggcaaaagtgttattaggttct
gcaacgccatctatagaaacagtatacaacgcacagcaagggaaatatggttatgtgtct
ttaaaacaaagacatggaggtattttaatgcctgagattaatcttgtagatattaaggag
aaaagcaaaaagcgtgagatgacgggtcacttttctgataccttaatacgcgcaattaca
gatgcactagcactaggggagcaggtaattctctttcaaaaccgtagaggtttctcacct
atattagaatgtactacttgtggtcacgcgccacaatgtcctaattgtgatgtaagtctt
acctatcataaatacaggtcacagctacgttgtcattattgtggttataatatcgcttta
cagcagaaatgtatggcttgtggaagtgcagagcttactactaagggttttggtacagag
caaatagaattggaactcaaagagctatatccagataaatctattgcaagaatggattct
gatactactcgtggcaaatatggatttgaaaagctcattactgcctttgaacaagagcaa
atagatattcttgtaggtacacaaatgctaactaaaggtttagactttagaaatgtgact
cttgtgggaattatgaatgcagatagcatgcttaattttccagattttagagcacatgaa
cgtagttaccagttgattgcacaagtgtcgggtagggcagggcgaacagaaaaacaaggt
aaagtactcgtgcagacttataatccttaccatcagatcctacagcaggtttctgcaaat
aagtttgaagagatgtacaaggagcaattagaagaacgacgtaattttaagtatccacct
tttcatagattgatacgtattactttaaagcatcgagattatcaaaaaatagaagaggcg
agtatctggctcgcaaaagcattgcgtcaaacactaggagcagatactgttttagggcct
gagacgccttctgtagctagaataaggaatcaatatagacgtaatgtactaattaagata
agccgccgccagaaacttttagaaacaaagaaggctataaagcgagttgtcactagtttt
aatgcgattgctccttacagaagtgtacggcttgtgatagatgtggattgttattag
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