Dokdonia sp. 4H-3-7-5: Krodi_2743
Help
Entry
Krodi_2743 CDS
T01484
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdi03032
]
Krodi_2743
03400 DNA repair and recombination proteins [BR:
kdi03400
]
Krodi_2743
Enzymes [BR:
kdi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Krodi_2743
DNA replication proteins [BR:
kdi03032
]
Prokaryotic type
DNA Topoisomerases
Krodi_2743
DNA repair and recombination proteins [BR:
kdi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Krodi_2743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Motif
Other DBs
NCBI-ProteinID:
AEE20718
UniProt:
F4B3A6
LinkDB
All DBs
Position
complement(3100689..3103235)
Genome browser
AA seq
848 aa
AA seq
DB search
MAAGEKLISINIEDEMKSAYIDYSMSVIVSRALPDVRDGLKPVHRRVLYGMHELGIRASG
AHKKSARIVGEVLGKYHPHGDTSVYDAMVRMAQEWSLRYMLIDGQGNFGSVDGDSPAAMR
YTEARMQKISEDMLADIDKDTVDHQLNFDDTLKEPTVLPTRVPGLLINGASGIAVGMATN
MPPHNLSEVVDGIHAYIDNNDVTIDELMEHVKAPDFPTGGTIYGYDGVREAFKTGRGRVV
MRAKATFEEVKGRECIIVTEIPYQVNKADMIKKTADMINDKKIEGISAIRDESDRNGMRI
VYVIKRDAIPNIVLNKLYKYTALQSSFSVNNIALVNGRPEMLNLKDMIHHFVEHRHVVVV
RRTEYELKKAEARAHILEGLIIASDNIDEVIAIIRGSANGDEARQNLIERFKLSEIQAKA
IVEMRLRQLTGLEQDKLRSEYEEIMKTIEDLKDILAKKERRMSIIREELQEIKDKYGDER
RSVIEYAGGDVSITDLIPDKKVVITISNAGYIKRTSLTEYKTQNRGGVGTKASTTRNEDF
LEHLFVGTNHQYMLFFTQKGKCFWMRVFEIPEGSKTSKGRAIQNLINIEQDDEVKAFVCT
GDLKDEEYINNHFIIMATKKGQVKKTALEQYSRPRTNGINAITIKDDDELLSVKLTTGES
QVMLALKSGKAIRFEESKTRPMGRNASGVRGITLANDQDEVIGMVSVNDVESNILVVSEK
GYGKRSSLEDYRITNRGGKGVKTISVTEKTGELVAIKNVTDADDLMIINKSGIAIRMEVA
SLRVMGRATQGVRLINLKGNDSIAAVAKVKSDDEAIDEEDLEGVVGETTENPAGESTTQE
QNTSNEEE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaggagaaaagctgatctcgattaatattgaagatgaaatgaaatctgcttac
atcgattattcgatgtcggttatcgtgtcacgtgcactaccagatgtacgtgatggtctc
aaaccagtacaccgtcgtgttctttatgggatgcacgagttaggaatacgagcaagcggc
gctcataaaaagagtgcgagaatagtaggagaggtgttaggtaagtatcacccacacgga
gatacttctgtatatgacgcgatggtgcgtatggctcaagaatggagcttacgttacatg
cttatagatggtcaaggtaactttgggtctgtagatggtgatagcccagcagcaatgcgt
tatacagaggctagaatgcagaaaatatctgaggatatgctggcagatatagacaaagat
actgtggatcatcaacttaactttgacgatacacttaaggaacctacagtgctacctaca
agagtaccaggcttacttattaatggtgcttctgggattgccgttggtatggcgacaaat
atgccaccacataacctctctgaggtggtagatggtattcatgcttacattgataataat
gacgttactatagatgaacttatggagcatgtaaaggctccagattttcctactggtggt
acgatatacgggtatgatggagtacgcgaagcttttaaaacaggtcgtggtcgtgtagta
atgcgggcaaaagctacctttgaagaagttaaaggtagagagtgcatcatcgtaaccgaa
ataccatatcaagtcaataaggcggatatgattaagaaaacggccgatatgatcaacgat
aaaaaaatcgaaggtatatctgctatacgtgatgaatctgaccgtaatggtatgcgtatt
gtttacgttataaagcgtgatgccatccctaatattgtacttaataaactttacaagtat
acggccttacaatcttcttttagcgtaaataatattgctcttgtaaatggacgtcctgag
atgttaaatcttaaggatatgattcatcattttgttgagcaccgtcatgtagtggttgta
agaagaacagaatacgaactcaaaaaagctgaggcacgtgcacatatactcgagggactc
atcatagcatctgataatatagatgaagttattgcgatcataagaggtagtgcaaatgga
gatgaagctagacagaatttaatagagcgcttcaagctttcagaaattcaagcgaaagca
attgtcgagatgcgtttacgccaacttacaggtctggagcaagacaaacttcgtagtgag
tatgaagagataatgaagactatagaagacttaaaagatatccttgccaaaaaggagcgt
cgtatgtctattataagagaagagcttcaagaaattaaagataagtatggtgatgagcgc
cgctcggttatagagtacgctggaggggatgtaagtatcacagatcttattccagataaa
aaggtagtgattaccatttcaaatgctggatatattaagagaacttcacttacagaatat
aaaactcaaaatagaggaggagtaggtacaaaagcatctactacccgtaatgaggatttc
ttagaacatttatttgtgggtacaaaccaccagtacatgttgttctttacacaaaaagga
aaatgtttctggatgcgtgtgttcgaaattccagaaggtagtaaaacttcaaaaggtcgt
gcgattcaaaatcttatcaatatagagcaggatgatgaagtgaaagcatttgtatgtacg
ggtgatttaaaagatgaggaatacatcaataatcactttattattatggctactaaaaaa
ggtcaagtaaagaaaactgcattagagcaatactctagacctcgtactaatggtattaat
gcaattaccattaaagatgacgatgaattattatctgtaaaacttaccacaggagaaagc
caagtaatgcttgcgctcaagtctggtaaggcaatacgctttgaggaaagcaagacaaga
cctatgggaagaaacgcttctggcgttcgtggcataactcttgcaaatgatcaagacgag
gtcataggtatggtttccgtaaacgacgtagaaagtaatattcttgtagtatcagaaaaa
ggatatggtaaacgcagtagtcttgaagattatagaattactaatcgtggaggaaaaggt
gtgaaaactatttctgtaacagaaaaaaccggtgaacttgtagctataaaaaatgtaaca
gatgccgatgatcttatgattatcaataaatctggtatcgccataagaatggaagtagct
tctcttagagttatgggtagagcaacacaaggtgttagacttataaatctcaaaggcaat
gattctattgcagctgtagccaaagtaaaaagtgacgacgaagcaatagatgaagaagat
ctagaaggggtagtaggtgaaactactgagaatcctgctggagaatcaacaacccaagaa
caaaacacctctaatgaagaggagtag
DBGET
integrated database retrieval system
