Dokdonia sp. 4H-3-7-5: Krodi_2829
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Entry
Krodi_2829 CDS
T01484
Name
(GenBank) pyruvate carboxylase
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi00020
Citrate cycle (TCA cycle)
kdi00620
Pyruvate metabolism
kdi00720
Other carbon fixation pathways
kdi01100
Metabolic pathways
kdi01120
Microbial metabolism in diverse environments
kdi01200
Carbon metabolism
kdi01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Krodi_2829
00620 Pyruvate metabolism
Krodi_2829
09102 Energy metabolism
00720 Other carbon fixation pathways
Krodi_2829
Enzymes [BR:
kdi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
Krodi_2829
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PYC_OADA
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
HMGL-like
Dala_Dala_lig_C
BSH_RND
BSH_YknX
ATP-grasp_3
ATP-grasp_LDMS
ATP-grasp_4
BSH_YhbJ
RimK
ATPgrasp_ST
TNP-like_GBD
ATPgrasp_Ter
YqfD
Motif
Other DBs
NCBI-ProteinID:
AEE20804
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Position
3203103..3206555
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AA seq
1150 aa
AA seq
DB search
MKIKKVLVANRGEIAIRVLRACTELNIATVAIYTYEDRYSQHRNKADESYQIGKNNEPLK
PYLDMDQIIDLAKSKHVDAIHPGYGFLSENSTFARKCAENGIIFIGPKPEVMDALGDKIT
AKKVAQQCGVPIIESNKTALDTLDIALSEATKIGYPLMLKAASGGGGRGMRIIRKVEDLQ
LSFDSARNEALNSFGDDTMFLEKYVEDPKHIEVQIVADSHGNIRHLYERDCSVQRRHQKV
VEMAPSYGLSQTLRDNLYKYAVAIATEVNYNNIGTVEFLVDADDNIYFIEVNPRIQVEHT
VTEMVTGIDLVKTQIFVAGGYNLSDKQIKIYGQESIGTYGFAIQCRLTTEDPVNNFTPDY
GKITTYRSASGMGIRLDAGSIYQGYKVSPFFDSMLVKVSAHGRTLDGSIRKMVRALKEFR
IRGVETNIHFLQNVIQTDTFKNGKTTVNFIQNTPALFDIKLSQDRTSKVVQFLAEVSVNG
NSDVKKKDDSKIFRTPETPLYSLSDPFPKGTKDLLTELGPEEFCKWLMAEKKIHYTDTTL
RDAHQSLLATRMRSYDMLKVASSFAKNHPNTFSMEVWGGATFDVCLRFLHESPWTRLREL
RKAVPNILFQMLLRGSNGVGYKAYPDNLIEKFVEKSWENGVDIFRIFDSLNWVKAMEPSI
QYVRNLTGGIAEGAISYTGDILDVKQTKYDLKYYTQLAKDLENAGAHMIAIKDMAGLLKP
YAATELVTALKDTVNLPIHLHTHDTSSLQTATYLKAIEANVDVVDVALGGLSGLTSQPNF
NAVVEMMKYQEREHPFEMDKLNQFSNFWEDTREIYYPFESGLKAGTAEVFEHEIPGGQYS
NLRPQAMALGLGDRFAEVKKMYAAVNSMFGNLVKVTPSSKVVGDMAIFMVTNNLTPEDVM
ERGDTISFPESVINFFKGDLGQPVGGFPKKLQAIILKNKDAYTDRPNAHLAPVDFDKEYE
TFTAKFQKGFTRPLEMEDFLSYMLYPKVFEQAHENYKKYGNLALVPTKNFFYGMALGEEI
LIELEPGKTVIIKLLSIGIPSEEGMRTVFFKVNGENRFVEVHDTSLNIKKVENLKVDPED
SNQIGAPLQGSLYKVLVKKGQEVKENDPLFIIEAMKMETTVVASKDGRVASITVSDGNMV
SQNDLVLTIE
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaaaaaagtccttgtcgccaatcgcggggaaattgctattagagtactgcgt
gcctgtaccgaacttaatatcgctacagttgcgatttatacctacgaagacagatactca
caacatcgcaataaagcagatgagtcttaccaaataggcaagaataatgagccactcaag
ccctatcttgatatggatcagattattgatctagccaaatctaaacatgtagatgccatt
caccccggatacggtttcttgtctgaaaactccacctttgctagaaaatgtgccgaaaac
ggtatcatttttataggccctaaacctgaggtaatggatgcgctaggtgataaaatcact
gcaaaaaaagtagcacaacagtgtggcgttcctattattgaaagtaataaaactgcgcta
gacaccctagatatcgctcttagcgaggctacaaaaataggctacccattgatgcttaaa
gctgcctctggtggtggtggtagagggatgcgtattatacgtaaggtagaagatttacag
cttagttttgactcggctcgtaatgaggcgctcaactcctttggtgatgatactatgttt
cttgagaaatatgtagaagatcctaagcatatagaagtacagattgtagcagattctcac
ggtaacattagacacctatatgagcgtgattgctctgtacaacgtagacaccagaaggtg
gtagagatggctccttcttatggactatcacaaacactacgcgataatctatacaaatat
gccgttgccatcgctactgaagtaaactacaacaatattggtactgttgagtttttggta
gatgcagatgataatatttacttcattgaagtaaatccgcgtattcaagtggagcatacg
gttactgagatggtgacaggtatcgatcttgtaaaaacgcagatttttgtcgcaggaggt
tataacctatcagacaagcagattaagatttacggtcaagaatctattggtacttatggt
tttgcgatacagtgccgccttactaccgaagatcctgtaaataactttacgccagattat
gggaagattactacctaccgtagtgcttctggtatgggaatccgtcttgatgcgggaagt
atttaccaagggtataaagtaagtccgttttttgactctatgctagttaaagtttctgca
catggtagaacgcttgatggctccattcgtaagatggtaagagcattaaaagaatttaga
atacgtggtgtagaaactaacattcattttctgcaaaatgtcatccagacagataccttt
aaaaacggaaaaactaccgtaaactttatacagaacactcctgccctatttgacatcaag
ctatcacaagacagaacttcaaaagtggttcagtttcttgcagaggtaagtgtcaatgga
aattctgacgtaaagaaaaaagacgattctaaaatttttagaacgccagaaaccccatta
tacagcctctcagaccctttcccgaaagggaccaaagacttactcacagagttaggtcca
gaggagttttgtaaatggctcatggcagaaaaaaaaattcactatacagatacgaccctg
cgtgatgcgcaccagtccctactggctacacgcatgcgttcgtatgacatgcttaaggta
gcatcaagttttgcaaagaatcaccctaacacctttagtatggaagtttggggaggtgca
acctttgatgtttgtctgcgtttcttgcacgaaagcccgtggacacgcctgcgcgaactg
cgtaaagcggtgcctaatatccttttccagatgctcttaagaggatcaaacggtgtagga
tacaaggcatatccagataacttgatagagaaatttgttgaaaaatcttgggagaatggt
gtagatatttttagaattttcgattcccttaactgggtaaaagctatggagcctagcatc
cagtacgtgcgtaacctcacaggaggtattgccgaaggtgcaataagctacaccggagat
attcttgatgtaaagcaaactaagtatgatcttaagtattatacccagctagcaaaagat
cttgaaaacgcaggagcacatatgattgccataaaagacatggcaggactcttaaaaccg
tatgccgcaacagaactggtaacagcgcttaaagacaccgtaaacttaccaatccactta
cacacacatgatacgtcatcactacagacggctacttatcttaaagccattgaagcaaat
gtagatgtggtagatgtggccctaggcggactatcaggacttacctctcaacctaacttt
aatgcggtggtggagatgatgaaatatcaagagcgtgagcatccttttgagatggacaaa
ctcaatcagttttcaaatttctgggaagacacccgcgagatctactacccttttgagtct
ggactcaaagcaggaaccgcagaagtttttgaacatgagattccaggagggcaatattct
aaccttagaccacaagcaatggcgctaggtcttggtgatcgctttgccgaagtaaaaaag
atgtatgctgccgtaaatagtatgtttggaaacctagttaaagtaactcctagctcaaaa
gtagtgggtgatatggcaatatttatggtaactaataaccttacgccagaagatgtgatg
gagcgtggcgacactatttccttcccagaatctgtgattaatttctttaaaggtgattta
gggcagcccgtgggcggattccctaaaaaattacaggctatcatcttaaagaataaagac
gcctatacagatcgccctaacgcgcatctggctcctgtagattttgacaaggaatatgaa
acctttacggcaaaattccaaaaagggtttacacgccctctagagatggaagacttctta
tcatacatgctctaccctaaggtgtttgagcaagcgcatgaaaattacaagaagtacggt
aacctagccctcgtacctactaagaatttcttttacggtatggcattaggagaagagatt
ctcattgagctagagcctggtaaaacggtcatcatcaagttgctttctattgggatacct
agtgaggaaggaatgcgcaccgtgttctttaaagtaaatggtgaaaaccgctttgtcgaa
gtacacgacacctcgctcaacattaagaaagtagaaaatcttaaagtagacccagaagac
agcaaccagataggcgctcccttacaaggatcgctctataaagtgcttgtcaaaaaaggg
caagaggtaaaggaaaacgacccactctttatcatagaagctatgaaaatggaaaccacc
gtagtagcctcaaaagacggccgcgtagcatccattaccgtaagcgacggcaatatggtc
tcacaaaatgaccttgtactcactattgagtag
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