Dokdonia sp. 4H-3-7-5: Krodi_2860
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Entry
Krodi_2860 CDS
T01484
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
kdi
Dokdonia sp. 4H-3-7-5
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kdi03016
]
Krodi_2860
Enzymes [BR:
kdi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
Krodi_2860
Transfer RNA biogenesis [BR:
kdi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
Krodi_2860
Prokaryotic type
Krodi_2860
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AEE20835
UniProt:
F4B3E8
LinkDB
All DBs
Position
complement(3243779..3244696)
Genome browser
AA seq
305 aa
AA seq
DB search
MSSNLHLTILGCYAAAPSSFKNPTSQVLDIRNHLFLIDCGEGTQVALRRNKIKFSRIKHI
FISHLHGDHFFGLMGVITTFSLLKRTAPLTIYGPKGLKEIILLQLKITQGFTSYPLQFVE
ITSKEPTVIYEDDEVMVTTIPLKHRIYTNGFYFQEKPGERKLDINACLNYEIDKAYYSKI
KQGGDITLDDGTLIPNDKLTFDPSKPKSYAYCSDTAYKEPIATQIKGATVLYHEATFLES
HAHLCKPTGHSTAAQAAQIAEKAEVESLVLGHYSIRYGDLNLFAEEARPHFENVLLGDDG
KEFTF
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtctagcaatctacatcttaccattttaggttgttatgcagcagcgcccagctctttt
aaaaatcctacctcacaagttttagacatacgcaatcacttatttcttatagattgtgga
gagggtacacaggttgcactgcgccgtaacaagattaagttttctcgtataaagcacata
ttcatatcgcatttacacggagatcacttttttggactaatgggagtgattaccaccttt
agtcttcttaaaagaacagcaccgctcactatttatggtcctaaagggcttaaagaaatt
atactcttacaattaaaaatcacgcaaggatttacaagttatcctctgcaatttgtagag
atcacaagtaaagaacctacggttatttatgaggatgatgaagtgatggtaaccacaata
ccgcttaaacatcgcatttatacaaatggcttttactttcaagaaaagccaggagagcgt
aaactagacataaatgcctgccttaattatgagattgataaggcttattactcaaaaatt
aagcaaggtggtgatattaccttagatgatggaacgcttatccctaatgataagcttacc
tttgacccatctaagcctaagagctatgcatattgtagtgatactgcttacaaagagcca
atagccacacagattaaaggagctaccgtgttatatcatgaagcaacttttttagaaagt
cacgcacatctgtgtaagcctacgggtcacagtactgcggcacaagcagcacagatagcc
gaaaaggcagaggtggaaagcttagtattaggtcattactccataaggtatggagatttg
aatctatttgcagaagaagctagacctcattttgagaatgtcttattaggagacgatggt
aaagaatttacattttaa
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