Dokdonia sp. 4H-3-7-5: Krodi_2993
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Entry
Krodi_2993 CDS
T01484
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
kdi
Dokdonia sp. 4H-3-7-5
Pathway
kdi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kdi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Krodi_2993
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kdi02000
]
Krodi_2993
Transporters [BR:
kdi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Krodi_2993
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEE20967
UniProt:
F4B3K5
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All DBs
Position
3387276..3388904
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AA seq
542 aa
AA seq
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MRKSSTWTVAIWLAVVLLSLCTVGCSNSKSTDRDHEVFRYNEQYQISTLDPAFARNPPII
WPVNQLFNGLVQLDNDLNVQPDIAKSWIISEDALTYSFTLRDDVKFHKHEAFNTVDSTRN
VVASDFVYSFDRLTDPAIASPGSWVLSNVAQYKAINDSTFIVQLKQPFPAYLGLLSMRYC
SVVPKEVTTFYGNEFRSNPIGTGPFKFKRWEEGVKLVLRKNELYYEKDAAGNSLPYLEAV
AITFLPDKQSEFLQFAQGNIDFLNSLDPSYKDEILTASGTLREKYENQVNFEKTPWLNTE
YIGFYLDSNTPEVQSTLLRKAVNYGFDREKMITYLRNGIGKPAVNGFIPKGLPGFDDIEG
YNYNPTLAKELVAQYTAQTGDQSPQLTIGTNSQYLDICEYIQRELQKVGLDVQIDVMPPS
TLRQMKSSGELDAFRASWIADYPDAENYLSLFYSKNFTPNGPNYTHFKSATFDSLYEKSL
SITDINERKQYYIKMDSLIIEQSPIIPLYYDEVVRFTQKTISGFEPNAQNFLVLKYVKKS
KK
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaaatctagcacatggacagtagctatatggctcgctgtcgtgcttttaagtcta
tgtacagtaggttgctcaaacagtaaaagcacagatcgagatcatgaggtgtttagatac
aacgagcaataccagatttcaacattagatcctgcttttgctcgtaatccgcctattatc
tggccagtaaatcaattatttaatggacttgtacaattagacaatgatctcaatgtgcag
ccagatattgctaagtcttggatcatttctgaagatgcccttacctactcttttacacta
cgtgatgatgtaaagtttcataaacatgaagcttttaatactgtagatagcacaaggaat
gtagttgcaagtgactttgtatattcctttgacagacttacagatccagctatcgcatca
cctggaagctgggtgcttagtaatgttgcgcagtacaaggctattaacgatagtacattt
atagtacaattaaagcagccttttccagcatatttgggattgcttagtatgagatattgc
tctgttgtacctaaggaagtgacaactttttacggaaatgaatttagatcaaaccctata
ggtactggtccgtttaaatttaaacgttgggaagaaggcgtgaaacttgtacttcgtaaa
aacgaattatattacgagaaagatgctgctggaaatagccttccttacctagaagcggtt
gccattacttttttaccagacaagcaaagcgaatttttacagtttgctcaaggtaatatt
gattttttaaatagtctcgatccttcttataaagacgagatacttactgcctctggaacg
ctacgcgagaagtatgaaaaccaagtgaattttgaaaaaacaccttggctcaacactgag
tatataggtttctatctagatagtaacactccagaagtgcaatctactttattacgtaag
gcagtaaactacggttttgatcgcgagaaaatgatcacctacctgcgtaatgggatagga
aaacctgcagtaaacggttttatcccgaaggggttgccaggttttgacgatatagaaggt
tataattacaatcctacacttgctaaagaacttgtagctcagtacaccgcacaaactgga
gaccaatcaccacaactcacgataggtacaaatagtcagtaccttgatatttgtgagtac
atacagcgggagttacaaaaagtaggactggatgtacaaattgatgtgatgcctccatct
accctacgccagatgaaaagtagtggtgagctagacgctttccgcgctagttggattgca
gattacccagatgccgaaaactacttgagtttattttacagtaaaaacttcactcctaac
ggacctaactacacacactttaaaagtgcgaccttcgacagtctttacgagaaaagctta
agtattacagatattaatgaacgcaaacagtactatataaaaatggactctcttattata
gagcaatcccctatcattccgctttattatgacgaagtggtacgatttacccaaaagacc
atttcaggttttgaacccaatgctcagaacttcttagtgttgaaatatgtaaaaaagagt
aaaaagtag
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