KEGG   Kwoniella dejecticola: 28963881
Entry
28963881          CDS       T10965                                 
Symbol
I303_100180
Name
(RefSeq) pre-mRNA-splicing factor RSE1
  KO
K12830  splicing factor 3B subunit 3
Organism
kdj  Kwoniella dejecticola
Pathway
kdj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kdj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    28963881 (I303_100180)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kdj03021]
    28963881 (I303_100180)
   03041 Spliceosome [BR:kdj03041]
    28963881 (I303_100180)
   03036 Chromosome and associated proteins [BR:kdj03036]
    28963881 (I303_100180)
Transcription machinery [BR:kdj03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     28963881 (I303_100180)
Spliceosome [BR:kdj03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    28963881 (I303_100180)
 Complex B
    28963881 (I303_100180)
 Complex C
   U2 SnRNP specific factors
    28963881 (I303_100180)
Chromosome and associated proteins [BR:kdj03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     28963881 (I303_100180)
    TFTC complex
     28963881 (I303_100180)
SSDB
Motif
Pfam: Beta-prop_RSE1_2nd CPSF_A Beta-prop_RSE1_1st Beta-prop_EML
Other DBs
NCBI-GeneID: 28963881
NCBI-ProteinID: XP_065824135
UniProt: A0AAJ8KHB4
LinkDB
Position
1:join(469447..469597,469730..469752,469821..469875,469953..470067,470136..470198,470331..470445,470499..470591,470650..470743,470802..471004,471066..471244,471309..471667,471729..472141,472203..472280,472337..472713,472775..473063,473128..473334,473393..473518,473583..474071,474170..474388)
AA seq 1215 aa
MHLLNLTLQAPSNITQAVVGSFSGAKGQEILAIRGGTKLEILKLNPGSGQLDTICSTEAF
GTVRNVTGFRLAGMSKDYILASSDSGRLSIIEFVVAPTPHFESLYQEVYGKSGSRRIVPG
QYLAVDPKGRSCLVGASKLVYVLNRNSEGKLFPSSPLEAHRNHNLVTHIVGVDQGYDNPL
YAALEMDYSESDEDPTGEAFENVQKYLTFYELDLGLNHVVRKWSEPTDRRANLLVQVPGG
QNANSDRFDGPSGVLVCTENHIIWKHMDVEAHRIPIPRRRNPLAQRGEKSRGLIIVAAVM
HKIKGAFFFLLQSEDGDLYKVWIEHEGEDVRALKIKYFDTVPVANSLCILKSGYLFVASE
FSDQNLYQFQALGDDDGEQEWSSTDYPDNGNVEGPLPFAFFSPRPLQNLLQVDTLSSLDP
ITDASVVNLLGPGSDTPQIYAACGRGPRSTFRTLKHGLDVSVLVSSPLPGVPTNVWTLKL
TDEDEYDSYIVLSFPNGTLVLSIGATIEEVNDTGFLSSGPTLAVQQLGDSGLLQVHPYGL
RHIRGADRVDEWPAPPGQTIVAATTNKRQVVIALSTAELVYFELDPEGSLSEYQDKKGLP
GNATCLSIAEVPEGRRRTPFLAVGCDNQTVSVISLEPDSTLTTLSLQALTAPPSSICLAE
IFDTSIDKNRATMFLNIGLSNGVLLRTVVDPVDGSLSDTRLRFLGAKPPKLVRSTIHGQP
SVLAFSSRTWLLYTYQDMLQTQPLIYDTLEYAWNLSAAMCPDGLIGISGNTLRIFTIPKL
GEKLKQDVLPLSYTPRKFISHPYNAVFYMVESDHRTYAPSTVDRIVQEKQASGSRVDMSA
LTLPPNEFGRPRAGAGHWASLLRVLDPLTNESLATFDLDEDEAAFSIAIAYFERGGGEPF
LVAGTGVKTTLAPRGCKEGYLRVYAIKEQGRVLEFMHKTKTDDVPLCLAAFQGFLLAGVG
KSLRLYEMGKKALLRKCENNSFPTGVATINVQGARIIVGDMQESTFYCVYRSVPTRQLLV
FADDTQPRWLTCVTEVDYETIVCGDKFGNIFLNRLDSGVSEKVDDDPTGATILHEKSFLM
GAAHKTELLAHYNVGSVVTSITKIPLVAGGRDVLVYTTISGSVGALIPFVSMDDVEFMTT
LEMHMRSQNVSLVGRDHLAYRGYYVPVKGVIDGDLCENFNLLPYGKQQAIAADLDERSVG
DVLKKLEQMRTSSAF
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgcatttactcaatctcaccctccaggcgccgtccaacattacgcaagctgtcgttggt
tcattctccggtgcgaagggacaagagatcttagcgattcgaggtgggacaaagttggag
attctgaaattgaatcctggttcagggcaactggacacaatatgttcgaccgaagcattc
ggaacagtcaggaatgtgacgggattcagattagcgggaatgtcaaaagactacatactg
gcatcctcagattcaggtcgattgtcgatcatagaattcgtagtggctcctacacctcat
ttcgagagcctgtatcaagaagtgtacgggaaatctggcagtcgacgtatagtacctggg
caatacctagcagtggaccctaagggtcgaagttgtttggtgggagcgtcgaagctcgtt
tacgtattgaacaggaattcggaggggaagctgttcccctcttctccgctagaagcccac
aggaatcacaatttggtgacgcatatagtcggcgtggaccagggttatgataatccgttg
tatgctgctttggagatggattattcggaaagcgacgaggatccgactggagaggcattc
gagaatgttcagaagtatctgaccttctacgagctggatttgggactgaatcacgtagta
aggaaatggagtgaacccacagataggagagcaaacttactcgtgcaagtccctggtggt
caaaacgccaactctgatcgatttgatggaccttcaggtgtgttggtatgtacggaaaac
cacataatatggaagcacatggatgtggaggcgcaccgaatacctataccgcgtcgaagg
aatccactggcgcagagaggagagaagagcagaggattgattattgtcgcggcagtcatg
cacaaaatcaagggagctttcttcttcttgcttcaatctgaagatggggacttgtacaaa
gtatggatagaacacgaaggagaggatgtgagggcattgaagatcaagtattttgacact
gtgccggtggcgaacagtttgtgtatcctgaagagtggatatctattcgtagcaagcgaa
ttcagcgatcaaaatctgtaccaattccaagcgctaggtgatgatgatggtgaacaagaa
tggtcatcaacagattatccagacaatggaaatgtcgaaggaccgttgcctttcgcattc
ttcagccctcgtcctctccagaatctccttcaagtcgataccctctcctcccttgatcct
atcacggatgcttcggttgtcaatctcctaggaccaggttcagacactccacaaatctac
gctgcttgcggtagagggccaaggagtactttcagaacactcaagcatggtttagacgtc
tcagttctggtcagctcgccgctacctggtgtcccgaccaatgtatggactctcaaactc
actgatgaagatgagtacgattcgtatattgttctgtctttccccaatggtaccttagta
ttgtctattggcgcaacaatcgaagaagtcaacgataccggtttcttgtcgtccggaccc
acactagccgtgcaacaattgggagactccggactactgcaagtccacccgtacggtcta
aggcatattagaggagcagatcgggtcgatgaatggcccgcaccccctggtcagaccatc
gtagctgccacgaccaacaaacgacaagtggtcattgcgctcagtacggcagagctagtc
tactttgaactggatcccgaggggtccttgagcgaatatcaggataagaaagggctgcct
ggaaacgctacttgtttgagtatcgctgaggtgcctgaggggcgacggaggacgcctttc
ctggctgtgggatgcgacaatcagactgtctcggtcatctcactggaaccggatagtact
ctcacaaccctctccttgcaggccttgaccgcaccaccatcctcaatatgcttggcggag
atattcgacacttctatcgataagaaccgagcgaccatgttcttgaacattggtctatcg
aatggtgtactgctgagaacggttgtcgatccagttgacgggtctctctcggatacacga
ctacgattcctcggtgcaaaaccacctaagttggtcagatcaactatacatggtcagcca
tcggtattggctttctcgtcgcgaacatggctactttacacgtaccaggacatgctacaa
acgcaaccgcttatttacgacacgctggaatacgcttggaacttgagcgctgccatgtgt
cctgatggtctgattggtatatctggtaacacgctccgaatattcaccataccaaaatta
ggcgaaaaactgaaacaagacgtccttcccctctcatacactccgcgtaaattcatcagc
catccgtataatgccgtcttttacatggttgaatcagatcaccgaacgtacgccccttcg
acagttgataggatcgttcaggagaaacaagctagcggaagtagagtggacatgtctgct
ttgacattgccgcccaatgaatttgggcgaccccgagcaggtgccggccattgggcttca
ctattgagagttctggatcctttaacgaacgagtccctcgcaacctttgatctagacgag
gacgaggctgccttctcgatagctatcgcatactttgagcgaggcggtggagaaccgttc
ttagtcgctgggactggagtcaagacgactctcgcgccgagaggatgtaaagaaggatat
cttcgagtgtatgctatcaaggagcaaggccgagtgctagaattcatgcacaagaccaag
accgacgatgtgcctctgtgtctcgctgctttccagggattcttgcttgctggtgtgggc
aaatcgctaaggctgtatgagatgggtaagaaggcgttgttgcggaagtgtgaaaacaac
agtttcccaaccggagtagcaacgataaatgtccaaggcgctcgaataatagttggagac
atgcaagagtctactttctactgcgtataccgatcagtccccactcgacaactactagtc
ttcgccgatgatacgcagcctaggtggttgacttgcgtgacagaggtggattacgaaacg
atagtgtgcggagacaaattcggaaatatattcttgaaccgattagactcgggtgtatcg
gagaaggtcgatgacgatccgacgggagcgaccatcttacatgagaaatctttcttgatg
ggtgccgcgcacaagacggaacttttagctcattacaacgtgggaagcgtcgtcacttca
atcaccaagataccgttggtagctggtggaagggacgtattggtctacacgacgatctcg
gggagtgttggcgcgttaattcctttcgtcagtatggacgatgtggagttcatgacaact
ctagagatgcatatgagatcgcagaatgtttcgctcgtaggacgggatcacctagcgtac
agaggatactatgtgcccgtgaaaggagtgatagatggagatctgtgtgaaaatttcaac
ttgttgccgtatggcaaacaacaagctatagcggctgatctggacgagcgatcggtggga
gacgtgctgaagaaattggaacagatgcggactagcagtgctttctag

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