Kwoniella dejecticola: 28964161
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Entry
28964161 CDS
T10965
Symbol
I303_100462
Name
(RefSeq) uncharacterized protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
kdj Kwoniella dejecticola
Pathway
kdj03018
RNA degradation
kdj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
28964161 (I303_100462)
09123 Folding, sorting and degradation
03018 RNA degradation
28964161 (I303_100462)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28964161 (I303_100462)
03041 Spliceosome [BR:
kdj03041
]
28964161 (I303_100462)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
28964161 (I303_100462)
mRNA degradation factors
5'-3' decay
Lsm complex
28964161 (I303_100462)
Spliceosome [BR:
kdj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
28964161 (I303_100462)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Herpes_MCP
DUF150_C
Motif
Other DBs
NCBI-GeneID:
28964161
NCBI-ProteinID:
XP_018266487
UniProt:
A0AAJ8KGN2
A0A1A6AEZ7
LinkDB
All DBs
Position
1:complement(join(1201349..1201371,1201453..1201539,1201597..1201668,1201769..1201904,1202029..1202040))
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AA seq
109 aa
AA seq
DB search
MSGRGGRGGSRGGAPNNAQAGDRKKRESILNLAQYVDTSVRVKFMGGREVTGILKGFDQL
MNLVMDDVVEEYENNAMPPRNLGLVVLRGPNVVLISPTDGSAEIENPFT
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaagaggtggccgaggaggctctcgaggtggtgcacccaacaacgcacaagca
ggcgataggaaaaagcgagagtcgatcctgaatctagcacaatatgtggacacgagcgtc
agagtgaaattcatgggtggtcgagaagtcaccggcatactgaagggtttcgatcaattg
atgaatctggtaatggatgatgtggtggaggagtacgagaacaatgcgatgcctccgcgt
aatctcgggctagtagtcttaagaggtccaaacgtagttctgataagtccgacagatggt
tcagcagaaatcgagaatcctttcacataa
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