Kwoniella dejecticola: 28964479
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Entry
28964479 CDS
T10965
Symbol
I303_100778
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
kdj Kwoniella dejecticola
Pathway
kdj03030
DNA replication
kdj03410
Base excision repair
kdj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
28964479 (I303_100778)
03410 Base excision repair
28964479 (I303_100778)
03420 Nucleotide excision repair
28964479 (I303_100778)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdj03032
]
28964479 (I303_100778)
03400 DNA repair and recombination proteins [BR:
kdj03400
]
28964479 (I303_100778)
Enzymes [BR:
kdj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
28964479 (I303_100778)
DNA replication proteins [BR:
kdj03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
28964479 (I303_100778)
DNA repair and recombination proteins [BR:
kdj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
28964479 (I303_100778)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
zf_DPOE_2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
28964479
NCBI-ProteinID:
XP_018266802
UniProt:
A0A1A6AFW7
LinkDB
All DBs
Position
1:complement(join(2090115..2090179,2090250..2090376,2090453..2090542,2090641..2095308,2095363..2095548,2095600..2095780,2095841..2095951,2096019..2096224,2096282..2096586,2096663..2096975,2097035..2097130,2097204..2097329,2097455..2097730))
Genome browser
AA seq
2249 aa
AA seq
DB search
MSFRGSFRGRGRGGNGSNTRFTGKKRSARGGGVAYGIDRPAPKREDDGTAIAEKFEEVKV
QDEIDEKLGFWRFESFRADGEKKIGWLVNMHQTLIQSSTVTGGLAAVDFYFIQDNGGMFK
ATIPYEPYFYVTCRAGTETMVEEWLLKRFEGVLVRVEREKKWDLSLPNHLLSAPPIFLKL
FFHNTSDLQSIRRELLPLAEANSAKFTAVDAYADVVGAENAMNGHGDDQGEKAWGAEDEG
RKRRDREPSECIIDIREHDINYYLRVAIDLDVRVGLWYNVISHTGIISLERITSLVKRAE
PVVMAYDIETTKQPLKFPDQQTDQIMMISYMIDGQGYLITNREIVSEDIDDFEYTPKDEY
PGDFTIFNEPDEPAVIRRWFEHIRDSKPTVMVTYNGDSFDFPFVDVRAKIHGISMYNEIG
FRPDIEDEYKCRGIIHMDCFRWVKRDSYLPQGSQGLKAVTKAKLGYNPTELDPELMTPYA
IEQPHLLAQYSVSDAVATYYLYMKYVHPFVFSLCNIIPLNPDEVLRKGSGTLCETLLMVE
AYQAHIIMPNRHEEPHGVTYEGHLLASETYVGGHVEALEAGVFRSDIPTHFKMEPSACQQ
LIDDLDAALKFSLIEEGNIKLEDVENYEEIKDQIQSALELMRDNPNRMDKPLIYHLDVAA
MYPNIMLSNRLQPDSMKDEAACAVCDYNRPDKTCDRRLEWAWRGEYFPAKRDEVNMVRYA
LEQEMFPPKYPNGPKRRFIDLPQGDQSALIHKRLGDYSRKVYRKTHETKIINKTSIICQR
ENSFYIDTVRAFRDRRYEYKGLHKTWKKNLDKAFEEGGAVSAVDEAKKMIVLYDSLQLAH
KCILNSFYGYVMRKGARWYSMEMAGITCLTGASIIQMARQLVEQIGRPLELDTDGIWCML
PGVFPEDFKFKLKNGKSFGVSYPCTMLNHLVHAQFTNDQYHELVDKDTGKYEVRKENSIF
FELDGPYKAMILPSSKEEDKLLKKRYAVFNPDGSLAELKGFEVKRRGELQLIKIFQSQIF
DKFLLGTTTEECYAAVAEVADQWLDILQSKAASLDDDELVELIAENRSMSKTLAEYGTQK
STSISTARRLSEFLGEQMVKDKGLSCRFIISAKPNGAPVTERAIPVAIFTAEEPVKRHFL
KKWLKDNSLTDFDLRTILDWAYYTERLGSVIQKLITIPAALQKVANPVPRIRHPDWLFKR
VAAKEDKLQQHKLTAMFSRMKTEVKPADIKGDIEDIGKPRAGPKMAMIKKKKVVRERTPE
PVPDPTEDYPDYIRVMKARWRKQRIERARARKQGQRQDGTVSSMLRTRSINLASRQWDII
QIASTSRPGEFRLWLAIDGTFQSVRLRVPREFYLNFKTLPIEGTFSDRYQTTSVARVLPR
GQAARHLFRLLVDEALYVEGESHFSSMINNPNVDGAYELQVPLVVRALLQFGTSCTLKTS
SMGGLNRGLDKGFDLSELERPGTSVLRHKYLDEGKGIKYHFLYHATFNSRHLLALFSPGE
AVRTYVVDASRTPERLPNPSRWYTERLEKASKGLFSYADEVEFVTNYYKNELSALRQLSK
DLQSIRHGLNVITLCSPFEHSYYQVVSPVFSEFPFITFKGSEEKPSLGWLVQTSRRMISQ
YLKLSSWIKAQIEVAAHYDVPVGNLGQDAPVFLADIEFARRLKQQDMLLWWSASSRPDLG
GSEEDANLSEELVTPRMSTKGCYSSVVLEMEIADLAINAVLQSALVNEMEGSGAGALAFD
SASHNLDEYAKGTANTSVMLGDAVLSTQTFGVLKSMVRSWFLDKARAHVKGIYSTPADLV
VDQFWRWISSSSSNMFEPALQRFLHGLMRKTFLQLLAEFKRLGTQVVYADFNRIFLLTTK
PDAGSAYAFAKYLVTAANSQELFRHLVIDVTQFWNYLAWMDVANFGGVKVTPEIAASRNP
PASKFEISMDWNIQSFLPGILQPIFEENVAQFIFKLYGAKRSSHDEREPLKVIHNLNIDL
PGENTSTINPAKEKEFAQGKKSISHDLTKRLLKDIMSVKKLQIQSHTDEVAAESLLFPSL
PGSRFDLYHATTKLNPVLELVKSILEVFSLDKEHMIEIQILKKNLLDLIGVKEFSQESTF
HNPCAADDSLQINMIICKKCNSLRDIDLCRDPDRLPSWDNENKELLSPPRKNWVCHRCDS
EYDKFQIEQPLIENIAKMITSYQTQDVICMKCSTSKSDNLAATCHCGGSFKSSLNKNEMK
LRLRMIRSVAIYHELPLVGSFVEEVLSRW
NT seq
6750 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcagggggtcttttcggggaagaggcagaggtggtaacgggtccaacacacga
tttaccggtaaaaaacgatcagcccgcggaggaggtgtagcgtatggtattgatcgaccg
gcaccgaaaagagaagatgatgggactgccatagctgagaagttcgaggaagtcaaagtc
caagatgagatagacgagaagttggggttctggaggtttgagagtttcagagcggatggg
gagaagaagatcggttggttggtcaatatgcatcaaacattgatacagagctcgacggtt
accggcggactggcggctgtggacttttacttcatacaggacaatggagggatgttcaaa
gcgacgataccgtatgagccatacttttacgtcacttgtcgggctggcacagaaacgatg
gtggaggaatggctgttgaagcgatttgagggtgttctagttcgtgtggaaagggagaag
aaatgggacctcagcttgccaaatcacctgttatcagcaccgccgatatttctcaagcta
tttttccacaacacatccgacttgcaatcgatacggcgagagctcttgcccttagcagaa
gccaattcggcaaaattcaccgctgtcgacgcctatgccgatgtcgtgggtgcggagaac
gctatgaacggtcatggagatgatcaaggggagaaagcttggggagcggaagatgaaggt
cgtaaacgtcgcgatagggagccttcggaatgtataatagatataagggagcacgatatc
aactactatttacgagtagcgattgatctcgatgtccgagtcggtctgtggtataatgtg
atatctcatacaggtataatcagtctagaaaggataacgtctttagtcaagcgagcggaa
ccggtagtcatggcgtatgatatcgaaactaccaagcaaccgttgaagtttccggatcaa
caaacggatcagattatgatgatatcgtatatgatcgatggtcaagggtacttgataacg
aatagagagatcgtatcggaagacatagatgacttcgaatacacaccgaaggatgaatac
cctggagacttcaccattttcaacgaaccggacgagcccgcggtcatacggcgttggttc
gagcatattcgagattcaaaaccgactgtcatggtcacatacaatggtgacagtttcgat
ttccccttcgttgatgtccgagccaaaatacacggaataagcatgtataatgagattggt
ttcagaccagatatagaggatgagtacaaatgtaggggcataatacatatggattgtttc
agatgggtgaagcgagattcgtatctgccgcaaggaagtcaaggtctcaaagctgtcacc
aaagccaagctgggttacaatcctacagaattagatcctgagctcatgacgccgtacgca
atagagcaaccacatcttctcgctcagtactccgtgtccgacgctgtggcgacatattac
ctgtatatgaaatacgtccatcctttcgtcttctcgctatgtaacatcattcctctaaat
ccggacgaagtgctaaggaaaggttctggtactctttgtgaaacccttttgatggttgaa
gcctaccaagcacatattataatgccaaatcgacacgaagaaccgcatggcgtgacttat
gaaggtcatttgctagcttcagaaacatatgtcggtggtcacgtagaagcgctggaagca
ggggtctttagaagcgatataccgacacatttcaagatggaacccagtgcttgtcaacag
ctcatcgatgatctggatgcggctttgaaattctcgttgatcgaggaaggaaatatcaag
ctggaagacgtggaaaactacgaggaaatcaaggatcaaatacagtcagcactcgagctc
atgcgggataatccgaaccggatggacaagcccctaatctaccatctcgacgttgcggcg
atgtaccccaacattatgttgtcgaaccgtttacagccggattccatgaaagacgaggca
gcctgtgcggtatgtgattacaatagacccgataaaacatgcgaccgaaggctggagtgg
gcctggcggggggagtatttcccggcgaaacgggacgaagtcaacatggtcagatacgct
cttgaacaggagatgttcccacccaaatatcctaatggaccgaagagacgcttcatcgat
ttacctcaaggcgaccaatcagctcttatacataagcggttgggtgattattctagaaag
gtttacaggaagacgcacgagactaagatcataaacaagacatcgatcatctgtcaaagg
gagaactccttctatatcgacactgtacgagccttccgagatcgacggtacgagtacaag
gggttgcacaagacatggaagaagaacttagacaaggcgtttgaagaaggaggcgctgtc
agcgctgtcgacgaagctaaaaagatgattgtcttatacgactcgctgcagctggcacac
aaatgtattctgaactcgttctatggatacgtcatgagaaaaggggcaagatggtactcc
atggaaatggcgggaatcacctgtttgacaggagcttcgatcatccagatggctcgacaa
ttagtggaacaaatcggcagaccgctagaactggatacagacggtatttggtgtatgctt
cccggcgtttttcctgaagacttcaaattcaagttgaagaacgggaaatcttttggtgtt
tcttacccatgtacgatgctgaaccacctcgtccacgctcaattcaccaacgaccagtat
cacgaattggtagataaggatactggaaaatacgaggttcgaaaagagaatagtattttc
tttgaattggacgggccttacaaagcgatgatcctaccttcctcgaaagaagaagataag
ttactgaagaagcgatacgcagtattcaaccctgatggatctttggcggagttgaaaggg
ttcgaagtgaaaagaagaggagaattgcaattgatcaagatcttccagtcccaaatattc
gacaaattcttgctggggacgaccaccgaagagtgttacgcagctgtagctgaagtggcc
gaccaatggcttgacatcctccagtccaaggctgcttctttggacgacgacgaattggtc
gagctgattgcggagaatcgaagcatgtcgaaaaccttggcagaatatggaactcaaaaa
tccacatcgatcagtaccgcaagacgattgtcagagttcttaggtgaacaaatggtgaaa
gacaaaggtctctcatgtcgattcatcatatctgccaagcccaatggggcgcctgtaacg
gaacgagcgatccctgtagcgatctttacagctgaagaaccggtcaagaggcatttcttg
aagaaatggcttaaggacaatagtctaacggatttcgatcttcgaacgatcttagattgg
gcgtactatacggagagattaggctcggtcattcagaaactcatcactatccctgctgcc
ctgcaaaaagtggccaatcccgtcccgagaatccgacatcccgattggcttttcaagaga
gtagctgcgaaagaggataaacttcaacagcataaactcacggctatgttctccagaatg
aagactgaagtcaagcccgctgatatcaaaggcgacatcgaagacataggcaaacccaga
gccggaccaaagatggccatgatcaagaaaaagaaagttgtccgagaaagaacaccggag
cctgtgccggatcccaccgaagattacccagactacatcagagtgatgaaagctcgttgg
cgaaaacaacggatagaacgtgcgcgagcaaggaaacaaggccagagacaagatggaacg
gtttcatctatgctacgtacgagatccatcaacttagcgtcgaggcaatgggacatcatc
caaattgcgtcgaccagtcggcctggagagttcaggttgtggttagccatcgacgggact
ttccaatccgttcgcctgagagtgcccagggaattttacctgaatttcaagacattaccg
atagaaggcaccttttcagaccgataccaaacaacatcggtagctcgagtcctacctcgt
ggtcaagcggcaaggcatcttttcagattattggtcgatgaagcattgtatgtcgagggc
gaatcacatttttcaagtatgataaacaacccaaatgtggacggcgcctacgagctgcaa
gttccccttgtcgtccgagcgttgctgcaattcggtacgagctgtacgttaaagactagt
tccatgggagggctgaacagaggtctggataaaggattcgatctctcagagctggagaga
ccaggcacgagtgttttgaggcataaatacctagacgaaggcaaaggtatcaagtaccac
ttcctgtatcacgcaacattcaattctcgacatctgctcgccctcttctcgcccggtgaa
gcggtcagaacttacgttgtggatgcttcaagaactccggaaagacttcccaatccttcg
agatggtacacggaacgccttgaaaaagcctccaaaggtctgttctcatatgcagacgag
gtcgaattcgtcacaaattattacaaaaacgaattgtctgctttgaggcaattatccaag
gatcttcaaagcatccgacatggtttgaatgtaatcacactctgctcaccattcgaacac
tcttactaccaagtggtctcaccggtattctcagagttcccattcatcaccttcaaaggg
tccgaggagaaacccagtttgggttggctagtccagacttcgagaaggatgatcagccag
tatctgaagctgtcaagctggatcaaagcgcaaatcgaagtggcagctcactacgacgtc
ccagtcgggaatttaggtcaagatgcgcctgtatttttggctgacatcgaattcgcacga
aggttgaaacagcaagatatgctcttatggtggtctgcctcttcgcggcctgatttaggc
ggttccgaagaagatgccaatctgagcgaagaattggtaacgcccaggatgtcgacaaaa
ggatgttactcgtccgtggttttagagatggagattgcagatctcgccataaatgcggtg
ctgcaatctgccttggtgaacgaaatggaaggctcaggagcaggagcactggccttcgac
tccgcctcgcataatttggacgaatacgccaaaggaacagccaatacctcggtcatgctt
ggtgatgcggtattatcgacacaaacgttcggcgttctcaaatcgatggtccgatcgtgg
ttcctcgataaagcccgagcgcacgtaaagggaatatattcgactccagccgatctagtc
gttgatcaattttggagatggattagttcctcatcgagcaatatgttcgaaccggctctg
cagcgattcttgcacggtctcatgcggaagacattcctccagctcttagcagaattcaag
aggcttggcactcaagtggtatatgcggatttcaaccggatcttcctgctcactactaaa
cctgatgctggtagtgcttacgcatttgcgaaatacttggtgaccgctgcgaactcccaa
gaactattcaggcatttagtgatcgacgtgactcagttctggaattatctggcgtggatg
gacgtcgcgaatttcgggggagtcaaagtaacgcctgagatcgctgcgtctcgaaatcca
cctgcctcaaaattcgagatctcgatggactggaacatccaatcattcttgcctggtatc
ctacaaccgatttttgaagagaatgtcgctcagttcatcttcaagttatacggtgccaag
cggtcttctcatgatgaaagggaaccgctcaaggtgatacataacctcaatatcgattta
ccgggagaaaacacgtcaactatcaacccagcaaaggagaaagagttcgcccagggtaaa
aagtcaatatcgcacgatctgaccaagaggttattgaaagatatcatgtcagtcaagaaa
ttacagatccaatcgcatacagatgaagtagctgccgaatcattacttttcccttcttta
cctggatcaagattcgatttgtaccacgccactaccaaactcaaccctgttttagagctt
gtcaagtcgatccttgaagtgttcagcttagacaaagaacacatgatcgaaattcaaatc
ttgaagaagaatttgttagacctaatcggagtcaaggaattttcacaggaatcgacattc
cataatccgtgtgcggcggatgatagtctgcaaatcaacatgatcatctgcaagaaatgt
aattccctaagagacattgatctgtgtcgggatccagatagacttccttcgtgggataat
gagaacaaggagctcttatcgcctccaaggaagaattgggtttgtcatagatgtgattcg
gaatatgataaattccagattgagcagcctttgatcgaaaacatagccaagatgatcact
tcttaccaaactcaagatgtgatctgtatgaaatgctctacttcgaaatctgacaatctg
gctgcgacatgtcattgtggaggatcgttcaagtcgtctctgaacaagaatgagatgaag
ttgagattgagaatgatcagaagtgttgctatatatcacgagttgcctttggtcggaagt
ttcgtggaggaggttttgagtcgctggtag
DBGET
integrated database retrieval system
