Kwoniella dejecticola: 28964571
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Entry
28964571 CDS
T10965
Symbol
I303_100869
Name
(RefSeq) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kdj Kwoniella dejecticola
Pathway
kdj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
28964571 (I303_100869)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kdj03400
]
28964571 (I303_100869)
Enzymes [BR:
kdj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
28964571 (I303_100869)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
28964571 (I303_100869)
DNA repair and recombination proteins [BR:
kdj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
28964571 (I303_100869)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
Motif
Other DBs
NCBI-GeneID:
28964571
NCBI-ProteinID:
XP_018266892
UniProt:
A0A1A6AG51
LinkDB
All DBs
Position
1:complement(join(2327787..2327990,2328138..2328278,2328341..2328505,2328578..2328860,2328926..2328939,2329017..2329204,2329275..2329342,2329403..2329413,2329479..2329617,2329668..2329720,2329773..2329888,2329942..2329957))
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AA seq
465 aa
AA seq
DB search
MPELPEVERARKLIHETCKGYKIKKVKSTEDKIVYTGGDDHETFAKEISGRTITGCERKG
KTFWMTLSGKGRLPVMHFGMTGMIQLKGQEPTWYRRRPRENPKVWPPKFYKFVLELEPQS
GSVGDEPVELAFLDGRRLGRLRLLPSPVTEHPPVSALGFDPVLNHPTFEEFEGLIAKKKG
TVKGMIMDQAFSAGVGNWVADEVLYQARIHPSCPVNHLSAQNIKDLHHHLRAVPLRAVEV
NADHRKFPEDWLFRWRWGKGKKQAKGKKKAEDAELQRSDEEGGEDIKPKGKDFLALPNSK
PATIVYVEVSGRTTALVEELQKMPDGVEIKPKISKGGKGSQSKKRPKGGDSDDGSSGLSE
EEEVTTPVKATTARQRDSASKKVKQEVKEERDVKPIRKARKSASTQDALSTARARSKPNG
KAPAPTPTKRKAGTKSRKSSGKHSEVRLEDGARAASSDLSDLSSE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactaccagaggtcgaaagagctcgtaagctcatacacgagacatgcaaagga
tacaagatcaagaaggtgaagagcaccgaagataagatcgtatataccggtggagacgat
catgagacatttgctaaagagataagcggacgaacgattacaggatgcgagagaaagggc
aagacattctggatgaccctgtctggtaaagggcgacttccggtaatgcatttcggcatg
actggtatgatacaattgaaaggtcaagaaccgacttggtacaggagaaggccaagggag
aatccgaaagtatggccacctaagttctacaaatttgtgcttgagctagaaccacagtca
gggtcagtgggtgatgagccagtcgaattagcgttcctcgacggacgtcgactcggtcgt
ttaagacttcttccttccccagtgacagagcatccgcctgtttcagcgttgggcttcgac
ccggtgctaaatcaccctactttcgaggaattcgaagggctgatagcgaagaagaaggga
actgtcaagggtatgattatggatcaagccttcagtgctggcgtgggcaattgggttgcg
gatgaagtcctatatcaagctcgtatccacccctcatgtccagtcaaccacctgtcggcg
cagaacatcaaagatctgcatcaccatttacgagcggtaccattacgagcagtcgaggtg
aatgctgatcatcggaaattcccagaagactggctattccgctggagatgggggaaaggc
aagaaacaagccaaggggaaaaagaaagctgaggatgctgaacttcagcgaagcgatgag
gaaggcggggaagatatcaagccgaaaggaaaagatttcttagcgttgcccaacagcaaa
cctgctacaatcgtttatgttgaagtcagcgggcggacgacagccttggtggaggaatta
caaaagatgcctgatggtgtagagattaagccgaagatcagtaaaggtggaaaagggagt
caaagtaagaaacgaccgaaaggcggtgattcggatgatggatcgagcggactgagcgag
gaagaggaagttacgacccctgtcaaagctaccacagccagacagcgagattcggcaagt
aaaaaggtcaagcaagaagtgaaggaggaacgagacgtcaagccgatacggaaagcccgc
aagtccgcctcaacgcaagacgccctatcgacagcccgagcgcgatccaagcccaatgga
aaagcaccagcacctacgcctaccaagcgaaaagccggaaccaagtctcgaaagtccagt
gggaagcattcagaggtgagattagaagatggagcccgagcagcttcatcagatttatcg
gatttgtcctctgagtga
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