Kwoniella dejecticola: 28964784
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Entry
28964784 CDS
T10965
Symbol
I303_101081
Name
(RefSeq) uncharacterized protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
kdj Kwoniella dejecticola
Pathway
kdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
28964784 (I303_101081)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28964784 (I303_101081)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
28964784 (I303_101081)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Bul1_C
Motif
Other DBs
NCBI-GeneID:
28964784
NCBI-ProteinID:
XP_018267102
UniProt:
A0A1A6AGQ8
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All DBs
Position
1:complement(join(2927212..2927306,2927444..2928672,2928770..2929344,2929438..2930034,2930097..2930183,2930259..2930702))
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AA seq
1008 aa
AA seq
DB search
MSASASASASASASTSSSETTKAVPNPIENFAEYLPHLTSALDNLTNHAANLPAKSDLSF
HRTLDRKFANDLDSASQRILKLTERLLKLVDQSQISTKSSSASSSSKAKSKAGVASTSRR
RKLEDQDDVVDGYKQSVVGVVDGLLEDADSCLDDLSGQKKKAAIAVKPHLAAKAGEKLPG
PFSKQAARLPQNILHAADIPKPQLLFDDITDNTPTTSAWKPSLAVKAHAMVPLDFVPELD
YQLTREEELDPSKEYWRREREIRFRQHPYYYESKHLPYPTSLFISSPPIQPKSFQDTPFT
FVDTPEQLSELTQHLKNVKEIAVDLEHHNMRSYFGFTCLIQISTREGDWVIDSLKLRKEL
RDDKLGDVFTDPGIIKVFHGSDSDIVWLQHDFEIFVVNLFDTYHATVVLGHQKRSLAGLL
QTYCNFEADKRYQMADWRIRPLPEGMLHYARSDTHFLLYIYDNLRNALLEQSSRPPSPDP
NGNEIIETTRRNPQQAMRDVLDRSADTALKLFEKDEYNEETGKGSGGWMSQARKWLNKDM
LEKEPGWQWRKLHAWRDKLARELDESPIYIMPQDILKALALLKSTAPILVKQAISSVRAP
LAAERVGEIVEVIKAAKAEWAATQAEISRINEAIAEAAKAKKLGIIQEKQKKAEDNVVPV
PDVWDAITVPSASTGPTASSTTTALVSTSNSSSIGKSKSTKKSGLFGSTIPSAAKSAKSP
PSSVNVAAGANTSKMTSSLFGNTLGAQQATGKGRKPRQARHKESSPGFESVQNSIHTELE
SKKIDSAESGALPAIKPEQVPYIPPIERSTAREGVNGFSSTSTSKMPQVQESISSTLTSQ
SGVTDVTPTSLPKPKKEEEGIVQVKKPRKPKRERNGSSSTPSAAGGKKVKLDTPPTDNQV
PTALGDGENQVLTNSKDKGKKEKKEKRSKVNIQDIPEFDYSSMPNLLDQPNAHLQASGDG
AKEKKKKKDKKRDKKSGGIGAIEAPTFGARAARDMSGPKGGNKSGTFI
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcctcagcgtcagcatcggcttcagcttcagcttcgacatcatcctcggagaca
acaaaggcagtgccgaatccaatagagaattttgcggaatatctaccccacctcacatca
gctctggataatctgacgaatcacgccgctaatttacccgcgaaatcggatctatcgttc
caccggaccctcgataggaagttcgccaatgatctggatagtgcgagtcagcgtatattg
aaattgactgagaggctgttgaagctcgtcgatcagagtcaaattagtacgaaaagtagt
tcagccagcagctcgagtaaagcaaagagtaaagctggtgtagcgtcgacgtctaggagg
aggaaattggaagatcaagatgatgtagttgatgggtataagcaaagtgtcgttggtgtt
gttgacggtctacttgaggacgcagattcctgcttagacgatctaagtgggcagaagaag
aaagctgctattgccgtaaagcctcatctagcagcgaaggcgggagagaagctccccggg
cctttctcgaaacaagccgcacgattaccccaaaacatcttgcatgcagcagatataccc
aagcctcaactcttattcgacgatataacagataacactcccacaacatccgcttggaaa
ccttccttggccgtgaaagcacatgctatggtcccgttagacttcgttcctgagctggat
tatcaattgaccagagaagaggagttggatccttcgaaggagtattggaggcgcgaaagg
gagatcagattccgacaacatccgtattactacgaaagcaagcatttaccgtatccgaca
tcgttattcatctcttctccacctatccaaccgaagtccttccaagatacccctttcaca
tttgtcgatacacctgagcaacttagtgaattaacgcaacatctgaaaaacgttaaagaa
atagcggtcgatctggagcatcataacatgagatcgtatttcggattcacgtgtctgatc
cagatctcgacgagagaaggggactgggtgatcgattcgttgaaattgaggaaggagttg
agggatgataagctgggtgatgtgttcacggatccaggtataatcaaggtgttccatgga
tcggatagtgacatcgtctggcttcagcatgacttcgagatattcgttgtcaacctgttc
gacacttaccacgccaccgttgtcctgggccaccaaaaacggtctcttgctggactactg
caaacatactgtaactttgaggccgacaaacgatatcaaatggctgattggagaataaga
ccattaccagaagggatgttgcactacgctcgatccgatacacacttcttactgtacatc
tacgacaacctgaggaatgccttactggaacaatcgagcagaccaccttcgcctgatccg
aacggaaatgagattatcgaaacgacacgacggaacccacaacaagctatgagggatgtc
ctcgatcgatcggcagatacggctctgaaactgtttgagaaggatgagtacaacgaagag
accggaaagggttctggcggatggatgagtcaagctaggaaatggctgaataaggatatg
ctcgaaaaagagcccggatggcagtggaggaaattacatgcgtggcgggataaattggca
agggaattggatgagtctcccatatatatcatgcctcaagatatcttgaaagccttagcg
ttgctcaagagcactgcgccgatattagtcaaacaagctataagctcggtccgagcacca
ttggcggccgagcgggtcggcgagatagttgaagtcatcaaagctgctaaagcggaatgg
gcggcaacccaagcggagattagtcggatcaacgaagcgatcgcggaagctgccaaagcg
aagaaattgggtataatacaagagaagcagaagaaggcagaagacaatgtcgtacccgtt
ccagatgtttgggacgctatcactgttccttctgcttctactggtccgacagcttcgtcg
acgaccacggcgttggtgtcaacttcaaattcaagttcgattggcaaatcgaaatccacc
aagaaatcaggattattcggatccacaatcccgtccgcggccaaatccgctaaatcaccg
ccctcatctgtgaatgtagcggctggagcgaatactagtaaaatgacatcctccttattt
ggaaatacactcggtgctcagcaagcgacagggaaaggcaggaaacctagacaagcgcga
cacaaagaatcatcgcctggctttgagagcgtgcagaattcgatacatacagagctggag
tctaagaagatcgactcggctgagagtggtgcattaccagcaatcaagccggaacaggta
ccgtacatcccgccgatcgagcgaagtacggcccgagaaggggtcaacggattcagctct
acctcgacttccaaaatgcctcaagtacaagagtctatttcgtctacactgacctcgcaa
tcgggtgtaacagatgttacgcctacgtctctgccgaagccgaagaaagaggaagaaggg
atagtccaagttaagaaacctcgtaaacctaaaagagaacggaatggatcttcttctact
ccgtctgctgcaggaggtaaaaaagtcaaacttgatactccgccgaccgataatcaggtt
ccgactgcacttggtgatggtgagaaccaggttttgaccaacagtaaagataaaggaaag
aaagagaagaaagagaagagatcgaaagtcaacatacaagatatacctgaatttgattat
tcgtcgatgcccaacttacttgatcaaccgaacgcgcacttgcaagcttcgggagatggt
gcgaaagaaaagaagaagaagaaggataagaagagggacaagaagagtggtggtatcggt
gcgattgaagctcctaccttcggagcaagggctgcgagggatatgagtggacctaaagga
ggaaataagagcgggacgttcatttaa
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