Kwoniella dejecticola: 28964939
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Entry
28964939 CDS
T10965
Symbol
I303_101233
Name
(RefSeq) uncharacterized protein
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
kdj Kwoniella dejecticola
Pathway
kdj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
28964939 (I303_101233)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kdj03041
]
28964939 (I303_101233)
Enzymes [BR:
kdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
28964939 (I303_101233)
Spliceosome [BR:
kdj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
28964939 (I303_101233)
Complex C
U4/U6.U5 tri-SnRNP related factors
28964939 (I303_101233)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
AAA_19
AAA_30
Cas3-like_C_2
PWI
Motif
Other DBs
NCBI-GeneID:
28964939
NCBI-ProteinID:
XP_018267255
UniProt:
A0A1A6AHC2
LinkDB
All DBs
Position
1:complement(join(3327295..3327407,3327490..3327676,3327861..3328196,3328280..3329082,3329146..3329248,3329303..3330952,3331010..3331048))
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AA seq
1076 aa
AA seq
DB search
MDLKTFISDNVVRILGSSDNATVDYVHSLAMSSKTPGDLYHALLGTGLSDSSDTQSFATQ
VHALVPRKTKPKVPKADKAAPSQRFALLMDEADSASSSSSSSKREKKSKKGKEKEKERES
GAVKLGRSSRKRDTEGNWESDEEEKEKEAKRLKLEEEADAKHGEPIEPEVKETEEERQER
ERLEDLAERDAFAERMKEKDKDRTKKLVTDRTGGGAEADRRAALAEESYESRQAAIEDLR
LHSRQEYLTKREQQRLDLLKMEIEDEKILFRNQKMSKREEQEYERKKELIKIMEARQRID
DGTNGYMMPDDYITEQGRIDQKKKKNALYQRYEESKPVEGQFVTDVDQWEYSQTDKSSLK
TGAQDKEVIVEDYDYVFDESVGINFLQDGRMAPEGDLSEDARNLLAQVDQLEKKAQSIQE
TRASLPIYEYREDLLEAIAEHQVLIVVAETGSGKTTQLPQYLYEAGYCKNGMKVGCTQPR
RVAAMSVAARVAEEMGVRLGQEVGYSIRFEDMTSDKTALKYMTDGMLLREFLTDPELSTY
SALVIDEAHERTLSTDILFGLIKDIARFRPELRLLISSATMNAQKFANFFDQAPIFDVPG
RRYPVDMFYTKQPEANYMHAAVTTILQIHTTQPKGDILLFLTGQDEIEAAEENLKETMYA
LGDKVAELIIAPIYANLPSEMQSKIFEPTPEKARKVVLATNIAETSITIDGVVYVIDPGF
VKQNNYNPKTGMSSLVVEPISRASAQQRAGRAGRVGAGKAFRLYTKWAFKNELLEDTIPE
IQRTNLGTVVLMLKSLGINDVLNFDFLDKPPAETIIRSFELLYALGALNHKGELTRLGRR
MAEFPVDPMLSKAIINSENYKCTHEVLTIISMLQESGSLLYRPKDKRVHADKAHKNFIKP
GGDHFTLLNIFEQWAETNYSQQWCYENFMQFKSLSRVRDIRDQLAQLCDRVEVSIESTPN
EIVPVQKALTAGYFYNTARIDKGGGYRTTKNNHSVYVHPSSCLIGMQPPPRFILYYELVL
TSKEYMRQCMPIEGSWLAELAPHYFNKNEIDQMLGSASKVKMPKAIEQPKVGPVNP
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaaaactttcattagtgacaatgtcgtccgaattctcggctcttcggataat
gctacggtggactacgtgcattctctggctatgtcttccaagactccaggagacctatat
cacgctcttctcggtactggactttccgattcttccgacacccaatccttcgccacccaa
gtacacgcccttgtaccccgcaagacgaaaccgaaggtgcccaaggccgacaaggcagct
ccttcacagcgattcgctctcttgatggatgaagctgattcagcgtcttcctcaagcagc
tcaagcaagagggagaagaagtcaaagaagggcaaggagaaggagaaggagcgggaatct
ggagctgtaaaactcggcagatcatcgcgcaagagggacacagaggggaactgggagtca
gatgaagaagagaaagagaaggaagcgaaacggctgaagctggaggaagaagccgatgcg
aaacatggggaaccgatagaacctgaagtcaaggagactgaagaggagcgtcaagagcgg
gaacgattagaggatctagctgagagagatgcgttcgcagagcggatgaaagaaaaggat
aaagatcggacgaagaagctggtgactgatcgtacgggtggaggggcggaagctgatcga
cgagcagctttggcggaagaatcgtatgaaagtaggcaagctgcaatagaggacctcaga
ctgcattcccgacaggaatatctgacaaaacgagaacagcaaaggttggatctgctgaaa
atggagattgaggatgagaagatattattcaggaatcagaaaatgtccaagagggaagag
caggaatacgagcgcaagaaggaattgatcaagattatggaagctagacagaggatcgat
gatggaacaaacggctatatgatgcctgacgattatatcacggaacagggacgtatagat
caaaagaagaagaaaaatgcgctatatcaacgatacgaagagtctaaacctgttgaaggt
caatttgtgacggatgtagatcagtgggaatacagtcagacggacaaatcaagcttgaag
actggtgcgcaggacaaagaagtcatagtggaagactacgactacgtgttcgacgagtcg
gttgggatcaatttcctgcaagatggccgaatggcacctgagggtgatctctcggaagac
gctcgaaatctcctagctcaggtcgaccagctggagaagaaagcgcaaagtatacaggag
actcgggcatcgttgcctatctatgagtatcgcgaagatctgttagaagctatagcagaa
catcaagtgttgatcgtcgtagcggagacgggatccggcaaaacaacgcaattgccccaa
tacctctacgaagctggatactgcaagaatggtatgaaagtaggatgtactcaacctcgt
cgtgtggccgcgatgtcagtcgctgcgcgagtggcggaggagatgggtgtgaggctggga
caggaggttggttattcgatccgattcgaagatatgactagcgataagacggccttgaag
tatatgacggatggtatgttgttgagagagttcttgacggatccggagctgtctacgtat
tcagcgctggtcattgacgaggcgcacgagaggaccttgagtacggatatcctctttggg
ctgatcaaggatattgcacgatttcgaccggagctacggctgctgatatcgagtgctacg
atgaatgcgcaaaagtttgccaatttcttcgatcaagcaccgatctttgatgttcctgga
agacgatatcctgtcgacatgttctacaccaaacaacctgaagcgaactacatgcatgcc
gcagtcaccaccatccttcagatacacaccactcagccgaagggagatatcctgctgttc
ttgactggtcaagacgagatcgaagccgctgaagaaaatctcaaggaaacgatgtacgca
ctcggagacaaagtagctgaattgattatcgcaccgatttacgccaatttaccttccgag
atgcaatcgaagatctttgagcctacacctgaaaaagcccgaaaagtcgtactggctaca
aacatcgccgagacctccatcacgatagacggagtggtttacgtgatcgaccctgggttc
gtcaagcagaacaattataacccgaagaccggaatgtcaagtttagtggttgaacccatt
agtcgggcatctgcacaacagcgagcaggaagagcaggaagagtgggagctggaaaggcg
ttcagattgtatacgaaatgggccttcaaaaatgagttgctggaagatactataccggaa
attcaacgtaccaatcttggaacagtggtcctgatgctcaaatcgcttggaataaacgat
gttcttaatttcgatttcttggataaaccaccggcggaaacgatcatacggtctttcgag
ttgctctatgcgctaggtgcattaaatcacaaaggtgaacttacccgactcggacgacgg
atggcggagttccctgtggatccgatgttgagtaaggcaatcatcaatagtgagaactat
aagtgtacccatgaggtattgacgataatttcgatgttgcaagaatccggatctttactt
tatcgaccgaaagacaagagggtccacgccgataaggctcataagaacttcatcaaacca
ggaggagatcatttcaccttgttgaacatattcgaacaatgggcagaaaccaattattct
caacagtggtgctatgagaacttcatgcagttcaaatcgttgagtcgagtgagggatatc
cgggatcaactagcgcaactttgtgatagagtagaagtttcgattgaatcgactccgaac
gagattgttcctgtacaaaaggctctgacggcgggatacttctataataccgcccgaatc
gataaaggaggaggttatcgaacgaccaagaacaatcactcagtatacgtccacccatcg
tcatgcttgatcggcatgcagcccccgccacgattcatactgtactacgagctagtattg
acgtcaaaggaatacatgaggcaatgtatgccaatcgagggatcctggttagctgagctt
gcacctcattatttcaataaaaacgaaatcgaccagatgctcggaagcgcaagtaaagtc
aagatgcccaaagctatcgaacaaccgaaagttggaccggtgaacccgtag
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integrated database retrieval system
