Kwoniella dejecticola: 28965871
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Entry
28965871 CDS
T10965
Symbol
I303_101692
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
kdj Kwoniella dejecticola
Pathway
kdj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
28965871 (I303_101692)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kdj03041
]
28965871 (I303_101692)
Spliceosome [BR:
kdj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
28965871 (I303_101692)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
PRP4
Beta-prop_DCAF4
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_HPS5
NBCH_WD40
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_SPT8
WD40_like
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
28965871
NCBI-ProteinID:
XP_065824463
UniProt:
A0AAJ8KJB6
LinkDB
All DBs
Position
2:complement(join(623728..624283,624401..624508,624638..624850,624940..625223,625336..625429,625515..625588,625657..625785,625965..626149,626222..626240))
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AA seq
553 aa
AA seq
DB search
MDLDDLTVDNTYQLGGSDDERERAKNAALIEELDRKKKFRKMAVPTDDKKVRERLRAYGE
PMTLFGEGPGDRRDRLKYVQEQIEQARGGGGDGMDVDGDSDESSDSEEEEEGEFYTEGSD
DLLEARRKLARYSLSKARTRIARQRVEVGLPLGKIVSLRKEVFSELKTFNNLGSQFGDDR
PLSTIRFSPNSQYILTTSWTGDTKIWDLPNLNPVSTKKGHLDKIGGAAWHPQATLPGGIG
EDGVNFATGGGEGSVKLWSMSGDKPIATLTGHENRVGRVAFHPSGSYLGSAGFDGTWRLW
DVEKQKELLTQEGHSKEVYALAFQDDGALVSSGGFDAIGRVWDIRTGRTAMVLDGHIKEI
LAMDFAPNGYQVATGSGDDTVRIWDLRALKTQYMIPAHKSSVSDVRFFKSSSEISSIGIN
GDLPLSGTVKGGVTDSTLMEVDQDKSDDNDNVVQEEEEDVKPNINGNANGSTSTSTGTRT
EPIEGLNRSGLFLITSGFDCNVRIWSSDEWSLIKNLPTDSGKVMSVDISSDSKFIASASY
SRSFHLFGGDKSL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggatttggatgacttgaccgtcgacaacacctaccaattgggaggatccgacgatgag
cgcgaacgagccaagaatgccgctctgatagaggagctggaccggaagaagaaattcagg
aaaatggcggtgccgacggacgataagaaggtccgagagaggctgagggcttatggggaa
cctatgacgcttttcggtgaagggccgggagacaggcgagatcgtctgaaatatgtgcaa
gagcaaattgaacaagcccgaggaggcggaggggacggtatggacgtggatggagactca
gacgagagtagtgattctgaagaggaagaggagggagagttctacaccgaaggttcggat
gatctgttggaagcaaggaggaagctcgctaggtattctttgtcaaaggcacgtacacgt
atagcgaggcagagggtggaagtgggattaccattagggaagatcgtatcgctgcggaag
gaagtattctcggagctgaagacattcaataacctcggatcgcaattcggcgatgatcgt
cccttgtccactatccgtttctcccccaactctcaatacatcctgacaacatcctggacg
ggagacaccaagatatgggatctgcccaacctgaatcctgtttcaacgaagaagggtcat
ctggataagataggtggagcagcttggcaccctcaagctacattaccaggtggaataggt
gaagatggcgtaaatttcgctaccggtggtggagaaggaagtgtcaaattatggtcaatg
tccggagacaaaccgatagcgactttgacagggcacgagaaccgtgtggggcgtgtcgca
ttccacccgtccgggtcgtatctcggttcagcagggttcgacggtacatggcgcctgtgg
gacgttgaaaagcagaaagagctgttgacgcaagaaggacatagtaaagaagtgtacgct
ttggctttccaggatgatggagctttagtatcttccggtggattcgacgcgataggcaga
gtatgggatataaggacgggccgaacagccatggtcttagatggtcacataaaggagatc
ctagctatggatttcgctcccaacggataccaagtggctactggatcaggagacgatacc
gttcgaatatgggatctccgagccctaaagacgcaatacatgatccccgcccacaaatcg
tccgtatcggacgtacgattcttcaaatcctcaagcgagatctcgtcgatagggatcaat
ggggatctgcctttatcgggtaccgtcaaagggggtgtgactgattcgactttgatggag
gtggatcaagataagagtgatgataatgacaacgttgttcaggaagaagaggaggatgtg
aaaccgaatatcaatgggaatgccaatggctcaacatcaacatcgacaggaacaaggaca
gaaccgatagaaggattaaaccgatcgggcttgttcttgattacgagtggattcgattgt
aatgtccgaatatggtcaagcgacgaatggtcactcatcaagaacttaccgacggacagc
ggtaaagtcatgtcggtagatatcagtagtgattccaagttcatagctagtgcgagctat
agtaggagtttccatctcttcgggggtgataagagcttgtag
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