Kwoniella dejecticola: 28965985
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Entry
28965985 CDS
T10965
Symbol
I303_101581
Name
(RefSeq) uncharacterized protein
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
kdj Kwoniella dejecticola
Pathway
kdj03020
RNA polymerase
kdj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
28965985 (I303_101581)
09124 Replication and repair
03420 Nucleotide excision repair
28965985 (I303_101581)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kdj03021
]
28965985 (I303_101581)
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28965985 (I303_101581)
03400 DNA repair and recombination proteins [BR:
kdj03400
]
28965985 (I303_101581)
Transcription machinery [BR:
kdj03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
28965985 (I303_101581)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
28965985 (I303_101581)
DNA repair and recombination proteins [BR:
kdj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
28965985 (I303_101581)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
28965985
NCBI-ProteinID:
XP_018265909
UniProt:
A0A1A6ADC5
LinkDB
All DBs
Position
2:complement(join(339682..339735,339815..339946,340225..340275,340337..340490,340573..340688,340790..340801))
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AA seq
172 aa
AA seq
DB search
MFFLRELTHTILLHPSYFGAQLEDYLRQKLYEDVEGTCSGKHGYIISVITISDIGEGKII
PSTGQAKFKTTYTAIVMKPFKGEVVDGKVIHVNKMGFLAMVGPLQVFVSSHLTHGDMKYD
PNASPPCYRSNDEIIQKDTKVRMQIVGCRVEANDIFAIGTIKKDFLGQIRED
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcctgagagaactcactcataccatattacttcatccctcgtactttggtgcc
caattagaggattacctcaggcagaaactgtatgaagatgtcgaggggacatgtagtggt
aaacatgggtatataatatcggtgattaccatttccgatataggggagggaaaaatcata
ccttcgacgggacaggccaagttcaagactacatacactgctattgtgatgaagcctttt
aaaggtgaagtcgtcgatgggaaagtcatccacgtcaacaagatgggcttcttagctatg
gttggcccattgcaagtattcgtatcttcgcatcttacacatggagatatgaaatacgat
ccgaacgcttctccgccatgttatcgatcgaatgacgagattatacaaaaagataccaaa
gtcagaatgcagattgttggttgtcgagtagaagcgaacgatatcttcgcaattggaacg
atcaagaaagatttcttgggtcaaattagggaagattga
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