Kwoniella dejecticola: 28966409
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Entry
28966409 CDS
T10965
Symbol
I303_102695
Name
(RefSeq) uncharacterized protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
kdj Kwoniella dejecticola
Pathway
kdj03018
RNA degradation
kdj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
28966409 (I303_102695)
09123 Folding, sorting and degradation
03018 RNA degradation
28966409 (I303_102695)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28966409 (I303_102695)
03041 Spliceosome [BR:
kdj03041
]
28966409 (I303_102695)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
28966409 (I303_102695)
mRNA degradation factors
5'-3' decay
Lsm complex
28966409 (I303_102695)
Spliceosome [BR:
kdj03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
28966409 (I303_102695)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
28966409
NCBI-ProteinID:
XP_018264540
UniProt:
A0A1A6A9H3
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All DBs
Position
3:complement(join(812426..812516,812585..812712,812771..812811,812873..812900))
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AA seq
95 aa
AA seq
DB search
MASIESYVDHLVQVILYDGRIIVGKLKGYDPRTNLILADCVEREYSIDQGVEMIPLGLYM
IKGDNVALVAEIDEEKDSTIDYTEIKAEPLGEIHH
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatcgaaagctatgttgatcatctcgtccaagtaattctttacgatggacgt
ataatagtgggcaaattgaaaggctatgatcctcgaacgaacttgatactggcagattgc
gtggagagggaatactcgatagatcaaggtgtggagatgataccattagggctatatatg
atcaagggtgataatgttgccttggtggctgaaatagacgaggagaaggatagcacgatc
gattataccgagatcaaggcggaacctttgggcgaaatacatcactag
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