Kwoniella dejecticola: 28966495
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Entry
28966495 CDS
T10965
Symbol
I303_102781
Name
(RefSeq) uncharacterized protein
KO
K15542
polyadenylation factor subunit 2
Organism
kdj Kwoniella dejecticola
Pathway
kdj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
28966495 (I303_102781)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28966495 (I303_102781)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
28966495 (I303_102781)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
eIF2A
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_DCAF4
Tricorn_2nd
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
Ge1_WD40
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
28966495
NCBI-ProteinID:
XP_018264623
UniProt:
A0A1A6A9Q1
LinkDB
All DBs
Position
3:complement(join(1065626..1066818,1066883..1067034,1067115..1067235,1067309..1067654,1067753..1067857,1067920..1067988,1068066..1068287))
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AA seq
735 aa
AA seq
DB search
MVSTNAVAGPSRTRGQDSWFPTKYLEPNHPDNEEVHEQAAYQAAVTRQGGDDRKRKIKPR
RTVDYQGSVIKWRMLTKMKGIKEYRPPIHPNPSDIVNLLPAAALRLNPSTSICDQWVHTS
INKERSPTRVVQWTPDARRLLTGNDKGQFTLWNGYSFNYESITQVHDDSIRSFTYSQNGQ
ALVSTDKLGMIKYFTPHLTNIHGFQGHREACHGVSWSPNDERFVSGGDDGLVKIWSYREA
REEKVLSGHGWDVRCVDWHPTKGLIVSGSKDMLVKFWDPRTGKDLSTLHSHKSTINTCVW
SPEGHLVATAGGDAVIRLFDIRTFRELDAMKGHTKEINCLQWHPIHHSLFTSGDAAGTIN
HYSLTSPTPSEPITSLASAHEDAVFSLSYHPLGHLLCSGSKDFTARFWQRARPAGGHEND
RWHLGEEKAMLSKMDLESGNGWAGMKKDTQHDNDEKANLASASLPGLSNLVAAVNANPSF
NGLSSNNGQGMNQGANGLPGLGAYTSNTQPTTSTPLPPFGATGSGYGQAQAPQRINSPAQ
LDGYAAGGRNRAPLPSQGDMLRQNNVPESGRFDNSGGRRGGNGGGGGGGGGRYGNDRGQR
GGAAGGGNGGPSGFGAGGGYGGPPTTSGYGGPGSGAMSNQGGYNGPPPSLLPPQAQAQGQ
NGYGGYGHGQPPIGQGQGYGHGPPQGYGLPPQGGYGAPPPPPPQQQQQQQNSGRAPLPQG
YPSQGFGGGGGNGWR
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctacgaacgctgtagccggaccatcccgaacaagaggtcaagattcatggttc
cccacgaaataccttgaacccaatcatccggataatgaggaagttcacgagcaagctgct
tatcaggctgcggtcacacgccagggcggcgatgataggaagaggaagatcaagcctagg
cgaacggtggattaccaaggtagtgtcatcaaatggcgaatgttgaccaaaatgaaaggt
atcaaggagtatagaccgcctatacatccgaacccatctgatatagtcaacttactgcct
gccgcagcattgcggttgaatccctcaacgtcaatatgtgatcaatgggtacatacttcc
atcaacaaggagaggtcacctaccagggttgtacaatggacgccagacgcccgtcggttg
ctgacaggaaacgacaaagggcaatttactttatggaatgggtattctttcaactacgaa
tcgatcacacaggtacacgacgatagtatacgttcattcacgtactcgcaaaacggtcaa
gctttagtgtcgacggataaattgggaatgatcaagtattttactccgcacttgacgaat
attcacgggtttcaaggtcatagagaagcttgtcatggagtcagctggagtcccaacgac
gagaggtttgtgagtggtggagatgatggtctggtcaagatttggagttatcgagaagca
cgcgaggaaaaggtcttatcaggtcacggatgggacgtacgatgtgtcgattggcatcct
accaagggattgatcgtatcgggaagtaaggatatgttggtgaaattttgggacccgagg
acaggcaaagatctgagtacactgcattctcacaaatcgacgattaacacttgtgtatgg
agtcccgagggtcatcttgtcgcgaccgccggtggagacgcagtcatcaggttatttgat
attcggacgttcagagaactagatgctatgaagggccatacgaaggaaatcaattgtctg
caatggcatccgatccatcattctctcttcacttccggagacgcagcaggcacgatcaac
cattattccctcacctcacccactccgtccgaacctatcacctccttagcatcagcacac
gaagacgccgtattctccttatcgtatcatccacttggtcatctcttgtgttcaggttcc
aaagatttcaccgctcgattctggcagagagcgcgacctgcaggcggacacgagaacgac
aggtggcatctcggcgaagaaaaagccatgctttccaagatggatctggaaagtgggaat
ggttgggcaggtatgaagaaggacactcagcatgataatgacgaaaaagcgaatttggct
tcagcgagtttacctggtttatcgaatttagttgctgctgtcaatgccaatccatctttc
aacggtctgagtagcaacaatggacaaggaatgaatcaaggcgcaaatggattacctgga
ttaggagcttatacgtccaatactcagccgactaccagtacgcccctacccccattcggc
gcaactggatctgggtacggacaagcacaagcgccacagcgaatcaactcacctgctcaa
ctggacgggtacgctgcgggcggaagaaatagagcgccattgccttcgcaaggagatatg
ctgaggcagaacaatgtgccggagagtggtcggttcgataatagcggcggacgaagaggt
ggaaatgggggaggaggcggaggcggaggagggaggtatgggaatgacagagggcaaaga
ggtggtgcggctggaggtgggaatgggggaccaagtggattcggtgcaggaggaggatat
ggaggaccgccaacaacctctggatacggcggaccaggatcaggagcgatgtctaatcaa
ggtggatataatggaccacctccgtctctgcttccacctcaagctcaagctcagggacag
aatggatatggcggatatgggcacgggcaaccgccaattggtcaagggcaagggtatggg
catggaccacctcaaggctatggtcttcctcctcaaggtggctacggagcacctccaccc
cctccgcctcagcaacagcagcagcaacagaactcaggtcgtgcgccactgcctcaagga
tatccctcacagggtttcggcggaggaggagggaacgggtggagataa
DBGET
integrated database retrieval system
