Kwoniella dejecticola: 28966609
Help
Entry
28966609 CDS
T10965
Symbol
I303_102890
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
kdj Kwoniella dejecticola
Pathway
kdj03013
Nucleocytoplasmic transport
kdj03015
mRNA surveillance pathway
kdj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
28966609 (I303_102890)
09122 Translation
03013 Nucleocytoplasmic transport
28966609 (I303_102890)
03015 mRNA surveillance pathway
28966609 (I303_102890)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28966609 (I303_102890)
03041 Spliceosome [BR:
kdj03041
]
28966609 (I303_102890)
03009 Ribosome biogenesis [BR:
kdj03009
]
28966609 (I303_102890)
03012 Translation factors [BR:
kdj03012
]
28966609 (I303_102890)
Enzymes [BR:
kdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
28966609 (I303_102890)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
28966609 (I303_102890)
mRNA cycle factors
Stress granule specific factors
28966609 (I303_102890)
Spliceosome [BR:
kdj03041
]
Complex C
Other components
EJC/TREX
28966609 (I303_102890)
Ribosome biogenesis [BR:
kdj03009
]
Eukaryotic type
90S particles
Helicases
28966609 (I303_102890)
Translation factors [BR:
kdj03012
]
Eukaryotic type
Initiation factors
eIF-4
28966609 (I303_102890)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
28966609
NCBI-ProteinID:
XP_018264731
UniProt:
A0A1A6AA07
LinkDB
All DBs
Position
3:complement(join(1378902..1379154,1379224..1379385,1379521..1379795,1379993..1380420,1380492..1380501,1380611..1380656,1380717..1380733))
Genome browser
AA seq
396 aa
AA seq
DB search
MAGINAGDEKLVFESSEAVSVAPTFEALNLKEDLLRGIYAYNFEKPSAIQQRAIIPIMRG
RDVIAQAQSGTGKTATFSISALQSIDTKIRETQVLVLSPTRELAIQIQTVVLALGDYMNV
SCHACIGGTSVGEDIRKLEAGQQVVSGTPGRVFDMIRRRNLRTKDIKMLILDESDELLNK
GFKDQIYDIYRYLPPATQVVVVSATLPHDVLEMTTKFMTDPIRILVKRDELTLEGIKQFF
VAVEKEDWKFDTLCDLYDTLTITQAVIFCNTRRKVDWLTEKMREANFTVSSIHGEMVQKE
RDAIMAEFRGGQSRVLITTDVWARGIDVQQVSLVINYDLPTSRENYLHRIGRSGRFGRKG
VAINFVTVEDVRILRDIEQYYSTQIDEMPMNVTELT
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaatcaatgccggcgacgagaagctcgttttcgagtcttccgaggcagtctcg
gtggctcctactttcgaggcacttaacttgaaagaagacttacttcggggtatctacgca
tataactttgagaagccctcagctatccaacagagagcaatcataccgatcatgaggggt
agagacgtcatcgcgcaagctcaatcaggtacaggtaaaacggctactttctcgatctcg
gcattgcaatctatcgacaccaaaatccgagaaacccaagtcctagtcctttccccgacg
agagaattggctatacagattcaaactgttgtcttagctctgggagattacatgaatgtc
tcctgtcatgcgtgtataggagggactagcgtaggagaggatatcaggaagttggaggct
ggacaacaggttgtcagtgggacaccgggaagagtgtttgatatgatcagacgaaggaat
ctgcggaccaaagatatcaagatgcttatcctggatgaatccgatgaacttctgaacaaa
ggattcaaagatcaaatatacgacatctaccgatacctcccgcctgccactcaagtcgtg
gtcgtttccgctactctccctcacgacgtcttggaaatgaccaccaaattcatgactgac
ccaatcaggattttggtcaagcgtgatgaattgacgttggaaggtatcaagcaattcttc
gttgctgtcgaaaaggaggattggaaattcgataccctgtgtgatttgtacgacactctg
accatcactcaagccgtcatcttctgtaatactcgaagaaaggtagattggcttaccgag
aagatgcgagaagccaatttcacagtcagcagtatacacggagagatggttcagaaagaa
cgagatgcgatcatggctgaattcagaggtggtcaaagccgagtattgatcacgacagat
gtatgggcaagaggtatcgacgtccaacaagtatcgctagttatcaactacgatttaccc
acttcgcgtgagaactacttacaccgaataggtagatcaggtcgattcggtcgaaaaggt
gtagcgatcaatttcgtcactgttgaagatgttaggatcttacgggatatcgagcagtat
tattcgactcagatcgacgaaatgccgatgaacgtcactgaactcacatag
DBGET
integrated database retrieval system
