Kwoniella dejecticola: 28967252
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Entry
28967252 CDS
T10965
Symbol
I303_103529
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
kdj Kwoniella dejecticola
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kdj03021
]
28967252 (I303_103529)
03036 Chromosome and associated proteins [BR:
kdj03036
]
28967252 (I303_103529)
Transcription machinery [BR:
kdj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
28967252 (I303_103529)
Chromosome and associated proteins [BR:
kdj03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
28967252 (I303_103529)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
Tex_central_region
Spt6_S1
SPT6_acidic
HHH_9
SH2
Tex_YqgF
ILEI
HHH_3
Motif
Other DBs
NCBI-GeneID:
28967252
NCBI-ProteinID:
XP_065824848
UniProt:
A0AAJ8MH75
LinkDB
All DBs
Position
4:complement(join(679163..679341,679422..679752,679867..680006,680075..681254,681319..682098,682155..682487,682550..682695,682764..682920,682975..683863,683931..684550))
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AA seq
1584 aa
AA seq
DB search
MSSRSAPPEGEGEEIRPYGDERDSSEEESEDDPEEAKRIAEGFIVDEDDDDDEEDEEEDE
EERKRRKKERKKKRKREKLRAKREKQREDLKLSEDELELLNENRGLAGSSQARPLKRLRR
RSGSLGEGSDGDGGRAEPTLQDMFRDDEDRDRDDDEDDLGDFIEEDEDDMAAQGESEEQR
RQRKREEKLKRRQQKASKPELAGVDRASWDEIYAVFGDGQNYDWALDGEDGMDVDDDEDA
AKKDLRLEDVFDPAEIKARRLQDEDRAIANNDRPERHQLVNSTLSDNPVFASDTLYPPPD
LAAGWAHTKISTRTQYLFCGMHEEGSYPVPTIDNPAPYPAYRRLELAIEFRKAVSSALNM
MFVQHLEVPYLWHYKRDAFSKLENQGSSSIQFLERDELWSLYNLGIRFKAIFERNQHTQQ
SWDKIKSRRPDVQDEYLTTKLLPSICMMSIESAAEGSEWLSYHYAPDLKAVKEDEAIEEG
AKRLPERGDNEDLRSGPIMKLVEAYGISVSQVATTFNEPEGQPIPPKNADKLPNDLAEEF
AGQGTAFGSPESALQAAGHILTTEFSKDPAIRQQTRDFMEACGVISVTPTDRGMTVIDEY
HLYYNFKFLTRKPVQMFKDSPQFLHMLKAEDEGLITINIEADENAVQAFVETLVRCCRSN
DYGEISTAWNALRAEICSDVTRKYLVPSAAKWLKEHLKGEASEFVAERCRLELELRVNVR
PFSSTNMDQGETPSVLALTNGKGEIRDAIMAVMLDDDGNIRTQTKFDNLRDEVDKQSFVE
LVEKRKPRVVVIGGLSVQAARLRDDAASALRELAMRSYGQNPPVAEAYQSHEQYQHAVSE
FDAQLSPYLIPLIFVNDSTARLYMNSEEAEKEYPNLPVNGRYALGLARYTQNPLNAYAKL
GKQIASVTFMEHHQKLINTEKLLIHLERGLVNSVCFMGIEINSCVADAYQRSMLPFISGL
GPRKADALVHGIHKQGSLLNRLAFSDLGLFGPTIFENVAGFLTIENDLKDMMLEPENPQE
QPDPLDMTRIHPEDYEFAQKMCQDALDLDVEDVTDRHKSEVVQTLMLDDKRAQKLGELNL
DDFAFNLQRQGEGNKRHTLGEIVNELIRYRADRRPAFYVPTEWEVVTMLTGETERTIGRG
LKVTATVRKAITARVFCQLESGMDAILERDYVADEDQPPVTSCEDFFKPRQAIKAVVIQA
EPNRFQVRISTRESDLRQAVAFIQPFRDEPYNDLIRKGQAEDAAAAKKRRQAGKVKRVVN
HPNWHVMNSGQAEQFLASQHRGDVVIRPSSKGSDHLAVTWKVDEDIYQHIDVQEIDKPNE
YSLGRILRVSGRYSYSDLDELIINHVKAIARKLDEIQSHEKYKAEDDLEAYLKNYVQAHP
GRSMYGFSIDSDRPGYVKLCFLNKSTKDGGVIQTWPVAVLPGAYKLNNAEVPGVTELCNA
FKLQYSARLAEQGSGGKTPGIRLGKTPLPGGRTPALAGGRTPAPGGMSVNVMRGGATPMY
GHGHGHGQPQLQGRTPGQHGMTPNPYGAPPQAAYGGPPNGNGYGGQPGQGGYSSARQPSG
PPRPGYGGMTPSNPPPAGMNADRA
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcccgttcggcaccaccggaaggggagggcgaggagatccgaccgtacggggac
gagcgagactcttcagaggaagaatcggaagatgatccagaagaggccaaacggatagcg
gaaggattcatagttgacgaggatgacgatgacgacgaggaggatgaagaggaggatgag
gaagaacgaaagaggcggaagaaagagcggaagaagaagaggaagagagagaagctcaga
gcgaaacgtgagaaacagagggaagatctgaagttgtcagaagatgagctggagttgttg
aatgagaacagaggattagcaggttcaagtcaagctcgacccttgaagagattacgtcgc
cgaagtggatcattaggtgaaggatccgacggagacggaggaagagcggaaccgaccctg
caggacatgttccgtgatgatgaggacagggatagggacgatgacgaggatgaccttgga
gatttcatcgaagaagacgaggatgatatggcagcccaaggggaaagcgaggagcagaga
cgacaacgaaagagagaggagaagctgaagagaaggcaacagaaggcttctaaacccgaa
ttagctggtgtcgatcgagcatcatgggatgagatatacgcggtctttggagatggacaa
aattatgattgggcattagacggtgaagatgggatggatgtagatgacgatgaagacgcg
gcaaagaaagatttacgcttagaagacgtgttcgatcctgctgagatcaaagctcgacgt
ctgcaagatgaggacagagcaatagccaataacgaccggccggaaaggcatcaattggtc
aactccacattgtcagataacccggtcttcgcttccgatacactgtatcctccaccagac
ttagcggcaggttgggcgcataccaaaatctcgacccgtactcagtatctattctgtggg
atgcacgaagaaggatcgtatcctgtaccaacaatcgataacccggcgccgtatccagca
taccgacgtttggaacttgctatcgaattcagaaaagctgtgtcctccgctctgaatatg
atgtttgtccaacatctcgaggtaccctatctttggcattacaagagggacgcattcagt
aagctggaaaaccaaggttcgtcaagtatacaattcttagaaagggatgagctgtggagt
ctgtataacctgggaatacggttcaaagctatctttgagaggaatcaacatactcaacaa
tcttgggacaagatcaaatcgcgtcgcccggatgtgcaggatgaatatctgacgacaaag
ctcttgccgtcgatatgcatgatgagtatagaaagcgctgccgaaggctcagagtggctg
tcgtatcattatgccccggacttgaaagccgtgaaggaggacgaggctatagaggaaggt
gcgaaacgattgccggagagaggagacaacgaggacttaaggtctggaccaataatgaaa
ttggttgaggcgtatggaatatcggtatctcaagtggctactacgttcaatgagccagaa
ggccagcctataccgccgaagaatgcagataagttacccaatgacttggcagaagaattt
gctggacagggtacagctttcggatcgccggaatcagctctacaagctgccggtcatatt
ctgaccaccgaattttcaaaagatcccgcgattcgccagcagacaagagatttcatggaa
gcttgcggtgtcattagtgtgacaccaacggataggggaatgaccgtcattgacgaatat
cacctgtattacaacttcaaattcctcacacgtaaacccgtccaaatgttcaaggactcc
cctcaattcctgcacatgctcaaagctgaagacgaaggtctgataacgataaacatagaa
gcggacgagaacgccgttcaagcattcgtcgaaacattggtcaggtgttgtcgatcaaat
gactatggagagatatctaccgcttggaacgctttacgcgcggagatttgctcggacgtg
accagaaagtatctggtaccgtctgccgccaagtggttgaaggaacacttgaagggtgaa
gcgagcgaatttgtcgcagaacgatgtaggcttgagcttgaactgagagtcaatgtccga
cctttctcctcgacaaatatggatcaaggtgaaaccccatctgtcttagcattaaccaac
ggaaaaggcgagatccgcgatgcaataatggcagtcatgttagatgacgatggcaacatc
cgaacccagactaaattcgacaacctgcgagacgaggtggacaagcagtcatttgtagaa
ttagtggaaaagcgaaaaccaagagtagtggtaataggaggactctcagtgcaagccgct
cgacttcgtgacgacgccgcatccgccttacgggaattagccatgaggtcatacggtcaa
aacccacccgtcgctgaggcttatcagtctcacgaacaataccagcacgctgtatccgaa
ttcgacgctcagctatccccatacctcatacctttgatcttcgtcaacgactccacagcg
aggttatacatgaactcagaagaagcagagaaagaatatccaaatttaccggtgaatgga
agatacgccttgggtttagctagatacacccaaaaccccttgaacgcatacgccaagctg
ggtaaacaaatcgcctcggtgactttcatggaacatcatcagaaattgataaacaccgag
aagctgttgattcacctcgaacgtggtcttgtcaactcggtctgtttcatgggtatcgag
atcaattcttgtgtggcggatgcttatcaacggtctatgttgcctttcatctctggtcta
ggaccacgaaaggccgatgctcttgtccatggtatacataaacagggctcgctgctgaac
cgattggctttctccgatctcggtcttttcggtcccacaatattcgagaatgttgctgga
ttcttgaccatcgaaaatgatctgaaagatatgatgcttgagccggagaacccgcaagaa
caacccgacccgctagacatgactcgaatacatccagaagattacgaattcgcccagaag
atgtgtcaagatgctcttgatctagatgtcgaagatgtcaccgataggcacaagtccgaa
gtcgttcagaccttgatgctggacgacaagcgagcgcagaaattaggggaattgaatctg
gatgacttcgctttcaacttgcaacgacaaggagaaggaaacaaacgacacactctggga
gagattgtcaatgagctgatacgttatcgagccgatcgaagacctgcattctacgttcca
acggaatgggaggtggtcaccatgctcactggagagaccgaaagaacgataggcagaggt
ctaaaggttactgcgaccgtacgaaaagctataacggctcgagtattttgtcaattggaa
tcgggtatggacgctatactggaaagagactatgtagcggatgaagatcaaccgcccgtc
acgtcttgtgaagatttcttcaagcctcgtcaagctatcaaggcggtggtgattcaagct
gaacccaaccgattccaagtcaggatatctacccgagaatccgacttgcgacaagccgta
gcgtttatccagcctttccgagacgaaccgtataacgacctgatccgaaaaggacaagcg
gaagatgctgcagcagccaagaaacgaagacaagctgggaaagtgaaacgagtggtgaat
cacccgaattggcatgtgatgaattcagggcaagccgaacaattcttagcgtcacaacat
cggggagatgtggtcatccgaccctcgtcgaaggggtccgatcacttggcggtcacatgg
aaagtcgatgaagatatataccaacatatcgacgtgcaggagatcgataagccgaatgag
tattcgcttggaaggatcctgagggtgtcgggaagatacagttacagtgatttggacgag
ttgatcattaatcatgtgaaggcgatagcgaggaaattggacgagattcagagtcatgag
aaatataaagcggaagatgatcttgaggcatatctgaagaactacgtccaagctcatccg
ggtcgaagtatgtatggcttctcgatcgatagtgatagaccgggatatgtcaagctgtgt
ttcctgaacaaatcgacaaaggatggtggtgtcattcagacttggcctgtagccgtctta
cctggagcgtataaattgaacaacgccgaagtacctggagtcaccgaactatgtaatgcc
ttcaagctccagtattctgcgcgattggcagaacagggaagtggagggaagacacctggt
ataaggctaggtaagacgcctttacccggaggtagaactccagcattggcaggaggcaga
acacccgctccgggaggaatgagcgtcaacgtcatgcgaggtggagctacaccgatgtac
ggtcatggacatggtcatggtcaacctcagttacagggtagaaccccgggacaacatggc
atgactccgaatccatatggagcaccgcctcaagctgcatatggaggacctccgaatggc
aatggatatggaggacaaccaggacaaggcggatatagtagtgcacgacaaccatcagga
ccacctagaccagggtatggaggtatgacaccttcgaatccgcctccggcgggtatgaat
gctgatcgcgcgtga
DBGET
integrated database retrieval system
