KEGG   Kwoniella dejecticola: 28968885
Entry
28968885          CDS       T10965                                 
Symbol
I303_105368
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
kdj  Kwoniella dejecticola
Pathway
kdj03018  RNA degradation
kdj03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kdj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    28968885 (I303_105368)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    28968885 (I303_105368)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kdj03019]
    28968885 (I303_105368)
   03041 Spliceosome [BR:kdj03041]
    28968885 (I303_105368)
Messenger RNA biogenesis [BR:kdj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     28968885 (I303_105368)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     28968885 (I303_105368)
Spliceosome [BR:kdj03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    28968885 (I303_105368)
SSDB
Motif
Pfam: LSM SM-ATX SAF
Other DBs
NCBI-GeneID: 28968885
NCBI-ProteinID: XP_018262170
UniProt: A0AAJ8KS67
LinkDB
Position
6:complement(join(1365759..1365790,1365853..1365966,1366209..1366332))
AA seq 89 aa
MSSASPQPEEAAAPAGSPSEFLKNIVGKRVKVRIGSGVDYHGLLTCLDGYMNVALEETEE
WANGRKTAEYGDCFLRGNNVLYISALEEL
NT seq 270 nt   +upstreamnt  +downstreamnt
atgagctcagcatcaccacagcctgaagaagctgctgctccagctgggtcgccgtcggaa
tttctcaagaacatcgttggaaagagggtgaaagtcaggataggcagtggggtcgattat
catggtcttcttacatgtctggatgggtatatgaatgtagcgttggaagagacggaagaa
tgggcaaatgggaggaagacggcagagtatggtgattgtttccttcgaggaaacaatgtg
ctctatatttccgctttggaagagttatga

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