Kwoniella dejecticola: 28969940
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Entry
28969940 CDS
T10965
Symbol
I303_106222
Name
(RefSeq) uncharacterized protein
KO
K18748
protein SSD1
Organism
kdj Kwoniella dejecticola
Brite
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
28969940 (I303_106222)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
28969940
NCBI-ProteinID:
XP_065825404
UniProt:
A0AAJ8KU63
LinkDB
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Position
7:join(1613500..1615317,1615371..1616528,1616584..1616870,1616927..1617079,1617143..1617306,1617368..1617578,1617641..1617761,1617818..1617967,1618037..1618138,1618218..1618360,1618441..1618525,1618709..1618772,1618827..1619044,1619137..1619575,1619656..1619675)
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AA seq
1710 aa
AA seq
DB search
MADSIVAPIPQSGSVSPSPNTLAPPSNPSRPSSANSQRSNSSRGGRSSNISRSNSNASSR
GGSESGRGNPDRKKQSGPTTTISGGVSLGAAGNQPKKGNNTNGKKGRSPIPKEAKLEGSE
KSDAQQPQQQQRNGNKGKKPNSNRKPNPINTNVQNPNRPSSQNSSRKGGNDSTTSQSAPK
SIHTAVSAPRTAMEAAVDAATKKHHDQSGGDALASLQKMISDLKTLPTSAPSTGSSNGSR
SVSAGATKESPVSASAAIAKTPTEPVTIPNSSTSNSSNASKKLKADAPSFTPSFNATTSP
GLSVSPIAPIPSASVLHPRSVSQGSAVNQTNRRTSTGSAGGSSLNQNSATSPVQMYANSL
PPIYQNLSAHPEVDEEHSPMSFAQQAEMQYQQQQLLAAQQQQYQYIQLLQAQIAASQQLA
QQQAHHQQQHQQQQQQPMGSFIAPRFQALAQQRAAQQQQQTALQLAQAQQLYELQQAQLL
QQQREQEAARAKAIAETMKNQPVFAEDDEEPEVRNSISSVGPTGRPQLAPSFTFGAKPKH
VKSESISDRGSARDSMSPPSTHHTSPPVVVNRSEGIGGAAATGLAGLAARAHKRTGSEMS
AAMQQQLAIQQEIEALQAKQKALMQEDMTSQGSTPLSQLNTALQSKQTPSQTLSRHRRVQ
SSLPSATIPTELPDRSEEADQPRALRTIGEMPPPPVPSNGGHSRRHSVNVFNKAAGHGAG
FGSISGEVSIPEDYVSNGERGLGHHRSGSRSGFESGNWRVSGGGSANNNNNLGTVQVADL
AAAQAHLQSLAQFRAAAGGGHSKMASFSFPNMLPNLLAATTLQTPIGQSLWQQQQSFQMQ
LQQTSQGPQRKSLFAPYLPQASLPPLLQAGKLVVGVLRVNKKNRSDAYVATDVLEADIYI
CGSKDRNRALEGDIVAVELLDVDEVWGTKKDKEEKKRKKEENAAYDLKPAQAKKIEKKKD
DVEVEGQGLTLFEDEEVNDDTKPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEKQE
LERRERDGDRAGRRDEPEQRPKIVWFKPTDKRVPLIAIPTEQAPSDFIDNPEAYGDKLFV
ATIKRWPITSLHPFGTLVEELGPIGDVEVETSALLKDCNFPTEEFTDLTMKCLPPLPWSI
PDREYEVRTDLRDQRTFTIDPSTAKDLDDALSVKQNEDGTITVGVHIADVSYFVKANTAI
DREARKRATSVYLVQRAVPMLPPQLSEELCSLVPDVERLTFSAIFTFDQEGNVKEKKFAK
TIIKSNAKLSYGDAQTIINGGSLDPSKAAAAEIKEIEADIRTLHDLSSKIKRKRLDEGAI
LSNKLKVSFALDDNGKPVDVDAVKKIEANSLVEEFMLLANTSVAYLIANGLPEQALLRRH
EAPIERRLEGFVTRAHKLGFEMDATSAGTLQRSFEGIKDSDTVLCLELLKKKAMQRARYF
CTGMLDIAKYSHWALNTPLYTHFTSPIRRYADVLVHRMLDACLTSPNPNDVKFLMDRDQV
AKCAQQCNMKKASAKLAEEQSIHLYLCLLIHDLTERYGPVIRQAKVTGVLDAAFDVIIPE
FGIEKRVHVDKMPVENVVYDEHKDILSLYWTRQNVLSYLAETTEDPHLLKIKELGEKLIS
GSSTTQALEENSLFDNTGSGSGSNSNEKSKQYLKSSLRSEIPFEGLRSDSSGKHKIQDIK
ELSNLPVIITSDITKSPPVLVVYACNPYAS
NT seq
5133 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcgatagtcgcgcccatacctcaatccggctcggtgtcgccatcccctaac
accctagcaccgccttcgaatccctcacgaccctcttccgccaactcacagcgaagcaac
tcgtctcgaggtggtagatcttccaacatctctagaagcaattcaaatgcttcgtctcgc
ggtggatcggaaagtggaaggggcaatccagataggaagaaacagagcggacctacaact
accatcagcggtggagtaagtcttggcgctgcgggcaatcaacctaagaagggtaacaac
accaacggaaagaaaggtagatcgccgatacctaaagaagcgaagctcgagggaagcgag
aagtcggacgctcagcaaccacaacagcagcagagaaacggcaacaaaggtaaaaaaccg
aattctaatcgtaaaccgaatccaatcaacaccaatgtacaaaaccctaatcgaccttca
tctcagaactcgagcagaaaaggaggaaacgactcaaccacgtcgcagagcgctcctaaa
tctatccacacggctgtgtctgcgcctcgaacagccatggaggctgcggttgatgctgcg
accaaaaagcaccatgaccagtcgggtggcgatgcccttgcatctttacaaaagatgatc
tctgacctgaagaccctcccaacgtcagctccgtctactggtagctcgaacggctcaaga
tcagtcagtgctggtgcgactaaagaatcacccgtctcagcttcagctgcgatcgccaag
acccccactgaaccggtgacaatccccaactcttccacgtcgaacagctccaacgcttcc
aagaagctgaaagctgacgctcccagcttcactccttctttcaacgccaccacttcgccc
gggctgtcggtctcccctatagcacctataccatcggcaagcgtactccatccccgttca
gtatcacaaggcagcgctgtcaatcaaaccaacagacgaacttcgacaggatcggcaggc
ggttcaagtctcaaccagaattcagcgacgtcgcctgtccagatgtacgccaattcgctc
cctccgatctaccagaacttatctgctcatcccgaggtggacgaggaacactcgcctatg
tctttcgcacaacaagcagagatgcagtatcaacaacagcagctgcttgcggcgcaacaa
caacagtaccagtacatccagctactgcaagctcagatcgccgcgagtcaacaactggct
cagcaacaagctcatcatcagcagcaacaccagcaacaacaacaacagccgatgggaagc
ttcatcgcccctcgatttcaggctctcgctcaacaacgtgctgctcaacagcaacagcag
accgctcttcagctggctcaagcgcaacaactgtacgagcttcaacaggcccaactgtta
cagcaacagcgagaacaggaggccgcgagagccaaagctatcgctgagacaatgaagaac
caacctgtctttgcggaggacgacgaagagcctgaggttcgcaactctatttcttctgta
ggtcccaccggtcgaccacaactcgcgccgtctttcacctttggtgctaagccaaaacat
gtcaagagtgagagtatttcggaccggggctcagcacgagactcgatgtcacccccttcg
acccatcatacatcgcctcccgttgtcgtgaacaggtccgaaggtatcggaggagccgct
gctactggattggcggggcttgcggctagagctcacaagagaacgggaagcgagatgtct
gcggccatgcaacaacagctcgctattcagcaagaaatcgaagcactgcaagccaagcag
aaggcgttgatgcaggaagacatgactagtcaaggctctacccctctgagtcaactcaac
actgctttgcagagcaagcagaccccgtcccaaacactctctcgacaccgacgagtccaa
tctagtctaccttctgccaccatccccaccgagttgcccgatagatcggaagaagccgat
caacctcgtgctctccgaacaattggtgagatgccaccaccgccagtgccctctaacggc
ggtcactctcgtcgacacagtgtcaatgtcttcaacaaggccgctggtcatggcgctggg
ttcggcagtatcagcggtgaggtctccattccggaggattatgtgtcaaacggggaaaga
ggtctaggtcatcatcgatcaggaagtcgatctgggttcgaatccggtaattggagagtg
tccggtggtggatccgccaacaacaacaataatttgggcactgtacaagtcgccgattta
gcagctgctcaagcccacttgcaatcgctcgctcagtttagagcggcagccggaggtggt
cacagtaaaatggcatcattcagtttccctaacatgctcccgaacttgttagccgctaca
acattgcagacacccataggtcaatcgctttggcaacagcaacaatcgttccagatgcaa
cttcaacagacctcacaaggaccccaacgaaaatctctatttgcaccttacttgcctcag
gcctctttgccccccctacttcaagccggtaaattagttgtcggtgtattgagggttaac
aagaagaaccgatcggatgcttatgtcgctactgatgtgctcgaagctgatatctacatt
tgtggatcgaaggaccgaaacagagcgctagagggggatatcgttgcggtggaactgctt
gatgtcgacgaggtctggggtaccaagaaggacaaggaagagaagaagcgcaaaaaggaa
gagaacgctgcgtacgatctcaaacctgctcaagccaagaaaattgaaaagaagaaggat
gacgtggaagttgagggacaaggattgacgctattcgaggacgaagaggtcaatgatgat
acgaagccgacttacgctgggcatgttgttgctgttgtcgagcgtatgcccggacagctc
ttctcgggtcaactcggtgttctgcgaccttcctccgctgcgaccaaggaaaagcaagaa
ttggaacgacgagaaagggatggcgatagggctggacgaagagacgaacctgaacaaaga
ccaaaaatcgtctggttcaaacctaccgataaacgagtaccactcattgctattcccact
gaacaagcgccctcggactttatcgataatcccgaagcatatggagataagttgttcgta
gcgacgatcaagcgatggccaatcacttcactccacccattcggtactttggtagaagag
ctgggtccaatcggggatgtagaggtggagactagtgctttgctgaaggactgcaatttc
cccacggaggagtttaccgatctgaccatgaaatgtcttccacctttaccatggagtatt
cccgatcgggagtacgaggtccgaaccgatttgcgagatcagagaacattcactattgat
ccttcgactgccaaagacctcgacgatgcgttgtcggtgaagcagaacgaagatggcaca
atcacagtcggcgtccacattgcggatgtctcttacttcgtcaaagccaatactgcaatc
gatcgggaagctcgtaagagagctacgagtgtatacttggtacagcgggccgtcccgatg
ttaccgcctcagctctcagaggagctgtgctccctcgtacccgatgtggaaaggttgact
ttctctgcaattttcactttcgatcaagagggtaatgtaaaggagaagaaatttgcaaag
accattatcaaatcgaatgccaaattgtcctatggtgatgcgcagactatcattaacggg
ggatctctagatcccagcaaggctgctgcagcggagatcaaggagatcgaggctgatatt
agaactcttcatgatttgtcatcgaagatcaaacgcaagaggctggatgagggagctata
ctcagtaataagctcaaggtgtcgttcgcactggacgataatggaaagcctgtggatgtg
gacgcggtcaagaagatcgaggcgaattctttggtggaggaattcatgctgcttgccaat
acgtcggtagcttacctcatagccaatggtctgccggaacaagccttgttgagaagacac
gaagcaccaatagaaaggagattggagggcttcgtcacgcgtgctcataagctcggattc
gagatggatgctacatcggctggaactttgcaaagatcctttgagggcatcaaagatagc
gatacggtgttatgcttagaactgctcaagaagaaagctatgcaaagagctcgatacttc
tgtacgggtatgttggatattgccaagtattcgcactgggctctgaatactccgttatac
acccatttcacgtcaccaattcgaaggtatgcggacgtcctggttcatcgaatgcttgat
gcgtgcctcacaagtccaaaccccaatgatgtcaaattcctcatggatcgggatcaagtc
gcgaaatgcgcccaacagtgtaacatgaagaaggcatctgccaaattggctgaggagcaa
tctatccacttgtacctctgtttgctcatacacgacctcaccgaaagatacggcccggtg
atcaggcaagctaaagtcactggtgttttggacgctgcgttcgatgtcatcattcccgaa
ttcggtattgagaaacgcgtccacgtcgacaagatgccagtcgagaacgtagtatacgac
gaacataaagacatcttatccttatactggacccgacagaacgtcttgagttatttagcg
gagactaccgaagatccacacctattgaagatcaaagaattaggcgagaaattgatcagt
ggatcgtctacgactcaagctttagaagagaactccttattcgataacaccggttccggt
tctggatctaactcaaacgaaaagtcgaaacaatacctcaagtcgtctttgagatccgaa
ataccgtttgaaggtcttcgaagtgattcgagcggaaagcataagattcaagatatcaag
gaactgtcgaatttgccggtgatcattacgagcgatattacgaagtcgccccctgtgttg
gtggtttatgcctgcaatccttacgcctcgtaa
DBGET
integrated database retrieval system
