Kwoniella dejecticola: 28970278
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Entry
28970278 CDS
T10965
Symbol
I303_107177
Name
(RefSeq) uncharacterized protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
kdj Kwoniella dejecticola
Pathway
kdj03030
DNA replication
kdj03410
Base excision repair
kdj03420
Nucleotide excision repair
kdj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
28970278 (I303_107177)
03410 Base excision repair
28970278 (I303_107177)
03420 Nucleotide excision repair
28970278 (I303_107177)
03430 Mismatch repair
28970278 (I303_107177)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdj03032
]
28970278 (I303_107177)
03400 DNA repair and recombination proteins [BR:
kdj03400
]
28970278 (I303_107177)
Enzymes [BR:
kdj01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
28970278 (I303_107177)
6.5.1.6 DNA ligase (ATP or NAD+)
28970278 (I303_107177)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
28970278 (I303_107177)
DNA replication proteins [BR:
kdj03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
28970278 (I303_107177)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
28970278 (I303_107177)
DNA repair and recombination proteins [BR:
kdj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
28970278 (I303_107177)
NER (nucleotide excision repair)
Other NER factors
28970278 (I303_107177)
MMR (mismatch excision repair)
Other MMR factors
28970278 (I303_107177)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
FAS_N
Motif
Other DBs
NCBI-GeneID:
28970278
NCBI-ProteinID:
XP_018260862
UniProt:
A0A1A5ZZ06
LinkDB
All DBs
Position
9:join(581127..581133,581192..581332,581391..581766,581827..581895,581966..582137,582199..582339,582412..582513,582592..582754,582808..582883,582939..583024,583089..583300,583363..583545,583601..583831,583904..584251,584376..584546)
Genome browser
AA seq
825 aa
AA seq
DB search
MSGQETKPNIVKKKKRVVQSDDEEDDVPMNKSSLTKIAETSSPQKSPKKESSPPHKKPKV
SLTPEKIASIFAAPPKKVEDPKASVEPSKTPTKNVKEEKPKINGKSNGKDNKPVASIFAK
PAKASSSKVKVEEGVKAEVEEDGGRGSPTNDDEGEEELEDEEEEDEQEEKAAVRLASIFT
KNHKAVPVADKGWKDGEAVPYAALVSTFEKIEATTKRLEILELLTQFFLVVAKRDTAKQA
KDSNLLKVVYLCINRLCPDYMGIELGIGETLLIKAIAESTGRATTKIKEDLRKEGDLGKV
AMNSRNTQPTMFKPKALTVPYVFQNLTEIAKATGNASQAKKVGIIKKLLAACQGNEAKFI
VRSLEGKLRIGLADKTLVVALAHAIVLKGMSEKKIPHDQLAAKLEEGAEIVKSVYSELPN
YDLVIPALLDTGVEGLKERCKLTPGVPLKPMLAKPTKAIGEVLDRFEGKEFTCEYKYDGE
RAQVHLLEDGSIAVFSRNSENMSAKYPDLVEQVPRAIKPTVKSFVIDAEAVAFDLETKKI
LPFQDLSRRKRKDVKTEDITVRVHLFAFDLLYLNGESLLTKELKERRALLQEHFQPVESE
FAFAKSSDSQSTEEIGAFLEESVKDGCEGLMVKMLASSNSTYEPSRRSMNWLKLKKDYLS
GVGDSLDLVVIGAYYGKGKRTNVYGAFLLACYDQDSENYQTICKIGTGFSEEFLLESYNL
LKPLEIEVPRGDMEIGSAKPDVWFEPKIVWEVLTADLSLSPVYAAAHGLIDSRGISLRFP
RFIKIRDDKSADEATSAEQVSEFYQRQVTAGGGKKGGGGGEDDFW
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgagcggtcaggagacaaaacctaacatcgtcaagaagaagaagcgcgtcgtccagtct
gacgatgaggaagatgacgtaccaatgaacaagtcttctttaaccaagatagcggagacc
tcttcacctcagaaatcacctaagaaggagtcatcaccgcctcacaagaagcctaaggtt
tcacttactcccgaaaagatagcttcgatattcgcagcgccaccaaagaaagtagaggac
cccaaagcatcggtcgaaccttctaagaccccaacaaagaacgtcaaagaggagaagcct
aaaataaatggtaaaagcaatggaaaagacaataaaccggttgcgtccattttcgctaaa
ccggctaaagcatcttcttcaaaggtcaaagtggaagagggcgtgaaggctgaagttgag
gaagacggcggacgaggtagtcccacgaacgatgatgagggtgaggaggaattagaagat
gaagaggaggaggatgaacaggaagagaaggccgctgtaagactagcttcgatcttcacg
aaaaaccataaagctgtacctgttgctgataagggatggaaagatggggaagctgtgccg
tacgcagcattggtatcgactttcgagaagatcgaagccaccaccaaaaggctggagata
ctggaacttctcacgcagttttttcttgtggtcgccaaacgagacacggcgaaacaagcc
aaagattcgaatttgctcaaagtggtgtatctatgtataaataggctatgtccggattac
atgggtatagagctcggtataggagaaactttgttgatcaaagccatagcggagagtacg
ggtcgagccacaacgaaaatcaaggaggatttgcgaaaagaaggtgacttggggaaagta
gcgatgaactcccgaaacacgcagccgacgatgttcaagccaaaagccctcacagtacca
tacgtatttcagaatctgacggaaatagcaaaagcgaccggtaatgcttcacaagcgaag
aaagtgggaatcatcaagaagttactggctgcttgtcaagggaacgaagcgaaattcatc
gtccgatcactagaaggtaaattacgaataggtttagcagataagactttagtggttgct
ttggctcatgccatagtattgaagggaatgagtgagaagaaaataccccatgatcaactg
gctgcgaaattggaggaaggcgcggagatcgtcaagtccgtctacagtgaattgccaaat
tacgatctggtgattcctgcgttacttgataccggtgtagagggcttgaaggagcgatgc
aaacttacaccaggtgttcccctgaaacctatgttggcgaaaccgacgaaggctattggt
gaagtgcttgatcgatttgaaggcaaggaattcacatgcgaatacaaatacgatggagag
agggctcaagtgcatctgctggaggatggatcgatagctgtgtttagcagaaactcagag
aatatgagtgccaaataccctgatctggtggaacaagtgccaagggccatcaaaccaaca
gtcaagtcattcgtgattgatgcggaagcagtagcattcgacctggaaaccaagaagatc
ttgccattccaagatttaagtaggaggaagaggaaggacgtcaagactgaagatatcact
gttcgagtgcatctctttgcttttgacctgctatatctgaatggcgagtctttactcacg
aaggagctcaaagaacgccgagcgttactgcaagagcatttccagcccgtcgagtcagag
ttcgcctttgccaaatcatccgatagtcaatctaccgaagaaatcggtgccttcctggaa
gaaagtgtcaaggacggatgcgagggtttgatggttaagatgttggctagttccaattcg
acgtacgaaccaagcaggcgaagtatgaattggctcaagttgaaaaaagattatttatcg
ggagtaggagattccctagacttagtggtaattggagcctattatgggaaaggtaaacga
acaaacgtgtacggagccttcctactggcgtgttacgatcaagattcggagaattaccag
acgatatgtaagatcggtactgggttcagcgaggaattcttattggaatcgtacaacctt
ttgaaacccctagaaatcgaggtgccgagaggtgatatggagataggaagtgctaaaccg
gatgtatggtttgagccgaagatagtttgggaagtcctgactgcggatctgagtttatcg
cctgtctacgcggctgcgcatggtcttatcgattcgagaggtatctcattacgatttccc
cgattcatcaagatccgtgatgacaagtcagcggacgaggcgacatctgcagagcaggta
tctgagttctaccagagacaggtcactgcgggaggaggcaagaaaggaggtggaggtggg
gaagatgatttctggtga
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