Kwoniella dejecticola: 28971445
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Entry
28971445 CDS
T10965
Symbol
I303_107741
Name
(RefSeq) ATP-dependent RNA helicase eIF4A
KO
K03257
translation initiation factor 4A
Organism
kdj Kwoniella dejecticola
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28971445 (I303_107741)
03012 Translation factors [BR:
kdj03012
]
28971445 (I303_107741)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kdj04147
]
28971445 (I303_107741)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
28971445 (I303_107741)
mRNA cycle factors
Stress granule specific factors
28971445 (I303_107741)
Translation factors [BR:
kdj03012
]
Eukaryotic type
Initiation factors
eIF-4
28971445 (I303_107741)
Exosome [BR:
kdj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
28971445 (I303_107741)
Exosomal proteins of bladder cancer cells
28971445 (I303_107741)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
UvrD-helicase
Flavi_DEAD
tRNA-synt_1b
AAA_22
Motif
Other DBs
NCBI-GeneID:
28971445
NCBI-ProteinID:
XP_018259678
UniProt:
A0AAJ8KVB4
A0A1A5ZVJ8
LinkDB
All DBs
Position
10:complement(join(559786..559968,560056..560345,560432..560897,560974..561154,561259..561336,561625..561632))
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AA seq
401 aa
AA seq
DB search
MSDVKNETEGGLEMNGDLIESNWNQVVDNFDNMDLKGDLLRGVYAYGFERPSAIQQRAIM
PIITGRDCIAQAQSGTGKTATFSISILQRIDTTVKKTQALILAPTRELAQQIQKVVIALG
DYLNVDCHACVGGTAVREDMAKLAEGPHVVVGTPGRVFDMINRGALKSDAVKMFCLDEAD
EMLSTGFKDSIYDIFQLLPAETQVVLLSATMPPEVLDVTKKFMRDPIRILVKKDELTLEG
IRQFYIAVEKEEWKLDTLCDLYETVTITQAVIFCSTRRKVDWLTQKLHEREFTVSAMHGD
MDQAQREVIMKEFRSGSSRVLIATDLLARGIDVQQVSLVINYDLPASKENYIHRIGRGGR
FGRKGVAINFVTQDDVKMLREIETYYNTQVDEMPLNVADLI
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgtcaaaaatgagaccgaaggtggtcttgaaatgaacggtgatctcatcgag
tccaactggaaccaagttgtcgacaacttcgacaacatggacctcaagggtgaccttctc
cgaggtgtctacgcttacggtttcgagagaccttccgctatccaacaaagagctatcatg
cccatcatcaccggtagagactgtatcgctcaagctcaatccggtaccggtaaaaccgcc
accttctccatctccattcttcaaagaatcgacaccaccgtcaagaagactcaagccctt
atccttgcccctacccgagaattggctcaacaaatccaaaaggtcgtcattgccctcggt
gactacctcaacgtagactgccacgcttgtgtcggtggtaccgctgtccgagaggacatg
gccaagcttgccgaaggtcctcacgtcgttgtaggtaccccaggtcgagtattcgacatg
atcaaccgaggtgccctcaagtccgacgccgtcaagatgttctgtctcgatgaagccgat
gagatgctttccaccggattcaaggactccatctacgacatcttccaactccttcccgct
gaaacccaagtcgtcctcctctccgccaccatgccccctgaggtcttggacgttaccaag
aagttcatgagagaccccatcagaattttggtcaagaaggatgagcttaccctcgaaggt
atcagacaattctacatcgccgtcgagaaggaagagtggaagctcgacaccctttgtgat
ctttacgagaccgtcaccatcacccaagccgttatcttctgttccacccgaagaaaggtc
gactggctcacccaaaagctccacgagcgagagttcaccgtctctgccatgcacggtgac
atggaccaagctcaacgagaagtcatcatgaaggaattccgatccggttcttcccgagtc
ctcatcgctaccgacttgcttgcccgaggtatcgacgtccaacaagtatccttggttatc
aactacgatctccctgcttccaaggagaactacatccacagaatcggtcgaggtggtcga
ttcggtagaaagggtgtcgccatcaacttcgtcactcaagacgacgtcaagatgctaaga
gaaattgagacttactacaacactcaagttgatgagatgcctctcaacgttgccgatctt
atctaa
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