Kwoniella dejecticola: 28971681
Help
Entry
28971681 CDS
T10965
Symbol
I303_107991
Name
(RefSeq) ATP-dependent RNA helicase ded1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
kdj Kwoniella dejecticola
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28971681 (I303_107991)
03041 Spliceosome [BR:
kdj03041
]
28971681 (I303_107991)
03036 Chromosome and associated proteins [BR:
kdj03036
]
28971681 (I303_107991)
Enzymes [BR:
kdj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
28971681 (I303_107991)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
28971681 (I303_107991)
mRNA cycle factors
Common to processing body (P body) and stress granule
28971681 (I303_107991)
Spliceosome [BR:
kdj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
28971681 (I303_107991)
Chromosome and associated proteins [BR:
kdj03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
28971681 (I303_107991)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
CMS1
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
28971681
NCBI-ProteinID:
XP_018259910
UniProt:
A0A1A5ZW84
LinkDB
All DBs
Position
10:join(1217954..1218005,1218080..1218477,1218537..1220042)
Genome browser
AA seq
651 aa
AA seq
DB search
MTTGPINGLDGLEAKFNSGMKLNPERPAYVPPHMRGARGPAPPHFNAPAPAGPGYHQSPT
GLPTPATTPPQSRGSYAPPAARGAAFPPAAGRADDGGWGAPRRAPEPRSGGFGGGQPGFG
SWKNGQHVTGARNPRLEKELFGEEGDTVHQHTGINFDKYADIPVEATGTGVPEPVTEFTN
PPIDPVLLENIQYARYTTPTPVQKYSLPIVAGGRDLMACAQTGSGKTGGFLFPILSAMFT
YGPIAPPPDNSYGGGYNSRRKAYPTALILAPTRELVSQIHDEARKFAYRSWARPAVVYGG
ADIGQQIRALDRGCDLLSATPGRLVDLIERGRISLANVKYLVLDEADRMLDMGFEPQIRQ
IVEGEDMPGVHDRQTLMFSATFPKEIQMLARSFLKDYIFLSVGRVGSTSENITQRIEYVD
DADKRSLLLDLLLAEQSGGLTLVFVETKRMADSLCDFLQAQRHYATSIHGDRTQREREAA
LHAFRTGQAPILVATAVAARGLDIPNVTHVILYDLPTDVAEYTHRIGRTGRAGNTGTSTA
FFNRNNLNISRELIDLLKEANQVVPQWLIDVSSERSFGGGYGGRGGRGRGGGNRSGGRDV
RTQHGGGGFGGGAPRGNGGYGGGYGGGYGGYGGGGGGGFPPPAASGGASWW
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgactactggacctatcaacggcttagatggcctcgaagccaaattcaacagcggcatg
aagctcaaccctgagagacccgcttacgtccctcctcatatgcgaggtgccaggggacca
gctcctcctcactttaacgctcctgcacctgctggtcccggataccaccaatcacctact
ggactccccactccagctaccactccccctcaatccaggggttcttacgctccccccgct
gccagaggtgcagctttccctcctgccgctggtcgagccgatgatggaggttggggcgca
ccaagacgagctcctgaacccagatcgggaggtttcggaggcggtcaacctggtttcgga
agctggaagaacggtcagcacgttaccggtgctagaaaccctagattagagaaggaattg
ttcggtgaggaaggtgacaccgtccaccaacacaccggtatcaacttcgacaaatacgcc
gatatcccggtcgaagctactggtacaggagttcccgaaccagtgaccgaattcaccaac
cctcctatcgaccccgttcttctcgagaacatccaatatgctcgatacaccactcctact
ccggtacagaagtactccctccccatcgtcgctggtggtcgagacttgatggcctgtgct
caaactggttccggaaaaaccggtggtttccttttccccattctctccgccatgttcact
tacggtcctatcgctcctccccctgacaacagctacggtggtggatacaacagccgaaga
aaggcttaccctaccgctcttatcttggctcctacccgagaattggtatcccaaatccac
gacgaagctcgaaaattcgcttaccgatcatgggccagacctgctgttgtctacggtggt
gcggacatcggtcaacaaatccgagcactcgaccgaggatgtgatctgctttccgccact
ccaggtcgattggttgacttgatcgaacgaggaagaatctcgctcgccaacgtcaaatac
cttgttctggatgaagccgatcgaatgctcgatatgggtttcgagcctcaaatcagacag
atcgtcgaaggtgaagacatgcctggagtacatgacagacaaaccctcatgttttcagct
accttccccaaggagatccaaatgcttgcccgatcattcttgaaggattacattttcctc
tcagtcggtcgagttggttccacatccgagaacatcactcaaagaattgaatacgtcgat
gatgccgacaagcgatcattgcttcttgatctattgcttgctgagcaatccggcggactt
accctcgtattcgtagagaccaaacgaatggccgactcgctctgtgatttccttcaagct
caaaggcattacgccacctccattcacggtgacagaacccagcgagaacgagaagccgct
cttcacgctttcagaaccggtcaagcccctatcttggtcgccactgctgtcgctgcgcga
ggtttggatatccccaatgtcacccacgttatcctctacgatcttcccaccgacgtagcc
gaatacacccaccgaattggtcgaactggtcgagctggtaacaccggtacatccactgcc
ttcttcaacagaaacaatctgaacatttccagggaactcatcgatctgctcaaagaagcc
aaccaagttgttccccaatggctgatcgacgtctcgtccgaacgatccttcggtggcggc
tatggcggccgaggtggaagaggccgaggtggtggtaacagatccggaggtcgagatgtc
agaactcaacacggtggcggtggattcggtggaggtgcgcctcgaggaaatggaggatac
gggggaggctacggtggtggctacggtggctacggaggcggtggtggtggtggtttccct
cctcctgccgcctctggtggtgccagctggtggtag
DBGET
integrated database retrieval system
