Kwoniella dejecticola: 28971981
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Entry
28971981 CDS
T10965
Symbol
I303_106460
Name
(RefSeq) uncharacterized protein
KO
K12589
exosome complex component RRP42
Organism
kdj Kwoniella dejecticola
Pathway
kdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
28971981 (I303_106460)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28971981 (I303_106460)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
28971981 (I303_106460)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
28971981 (I303_106460)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
28971981
NCBI-ProteinID:
XP_018259354
UniProt:
A0A1A5ZUM9
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All DBs
Position
8:complement(join(373985..374251,374340..374805,374923..375224))
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AA seq
344 aa
AA seq
DB search
MSIPTLTLSPSEISYIQTSLSHPDTPTRLDGRSLLDSRGIEVAYNIFPHANGSARVKIGN
TEVIAGIKLEVVDYTPVSSSTSSGTVKPGSESWRGRVDVDITPQSFPSAQPNALSSLSTY
LSSIISSQFLPSIPSFPITTTKYFQPQLHLSLLSSDGNILTALIIASRSAFADLKIPKIK
VIQWTGESESESNAGGGGVIGKGDLSGIKAAISTRRKGKYVTKGNEDWDLDLSGDGEGLG
YMEGREKLPVLITLNLVPNSDNIFIDSTAQEESACPSKLHLFFSASTTPSMSSSGNKPES
KLKICGIRFEGGQSIDASRIKGLLEEGSRIAKELIDELNTSLPK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccccaccttgactctctcaccttcggagatctcatatatccagacatccttg
tcgcaccccgacacacccactcgtctggacggtcgatctttactcgattcaaggggtatc
gaggtggcatacaatatattcccacatgccaacgggtcggcaagggtgaaaataggtaat
accgaagtcatagcagggatcaaacttgaagttgtcgattataccccggtgtcgtcaagt
acgagctcaggtactgtcaagcctggatcagagagttggcgaggaagagtcgatgtcgat
ataacaccccaatcattcccctccgcccaacctaacgccctctcatccctctcaacctac
ttatcctccataatctcctctcaattcttaccttccatcccttctttcccaatcacaacg
accaaatactttcagcctcaactgcacttatccctcctctcttccgacgggaacatcctc
accgccttaatcatcgcttctagaagtgcattcgccgatctgaaaatcccaaagatcaaa
gtaatccaatggaccggcgaatctgaatctgaatctaacgcaggaggtggcggggttata
ggtaaaggtgatttgagtgggatcaaagctgccatatccacacggaggaaagggaaatac
gttaccaagggaaacgaggattgggatttagatttgtcgggggacggagaagggctggga
tatatggaggggagagagaaattacctgttctgatcactctgaatcttgtcccaaactcc
gataatatcttcatagattccaccgcgcaggaagaatcagcctgtccttccaaactccat
cttttcttctccgcatcaacaacgccgtccatgtcctcatccggaaacaagccggaatcg
aaattgaagatatgtggtatacggttcgaaggtggtcaatccatagatgcgtctcgtata
aaaggattattagaagaagggtcgagaatagcgaaagagttgatagatgagctgaatact
agtctccccaagtag
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