Kwoniella dejecticola: 28972248
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Entry
28972248 CDS
T10965
Symbol
I303_106808
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
kdj Kwoniella dejecticola
Pathway
kdj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kdj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
28972248 (I303_106808)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kdj03019
]
28972248 (I303_106808)
Messenger RNA biogenesis [BR:
kdj03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
28972248 (I303_106808)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
28972248 (I303_106808)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
28972248
NCBI-ProteinID:
XP_018259007
UniProt:
A0A1A5ZTR2
LinkDB
All DBs
Position
8:join(1419827..1419848,1420026..1420258,1420366..1420740,1420831..1421469,1421539..1421785,1421851..1421938,1422000..1422333,1423096..1423113)
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AA seq
651 aa
AA seq
DB search
MSMRKLAAEIDKTLKAVAVGVETFEATFDKLAHATNATQKDKTENDLKAQIKKLQKSRDQ
IKAWIGNNDIKEKGALLDNRRLIETQMERFKALEKEMKMKAFSKEGLIAQSKLDPAEKAR
RDMIDWVGNTIDELSRQIELTEAEAESLQVTKKKKSGNDRLSELEELNERRSWHISKLEL
VNRMLENNSLPVEDVENVQEDIKYFVEANAEEDFDYDQGLYDELNLQEEEDYIHDYGHVD
DLSNVDDASVADVTESVTSSAAASAPVPKTPAKEEVSSTSGKKGTPASKAASHDESPSPV
SAKKVPSRKATMETRKSTETIPPVPVPPPTTTIPVPTPKAAALPPIRYAAAAAAAVASSP
SVASTTTAQPETSPSKAREALPAAQLTESPHEEPPAPAAAPSAKVETPETKAPSPAKPEG
QTNGHAPPPPPGLATPSPLPATQTPAVPPQSTATPAPAPPGYAPQHAESSRAAQQPPASA
QPQPQSAQPGVMGNLMHSFEMAKEMSKRRTNDVHELNNALDGSYTNIPQQLDAEPPRYYH
PKNPIKTPSYYPQTRLPILEDKSIYSRLDLDQLFYIFYYMTGTYEQWLAAKELKRQSWRF
HKQYLTWFQRAHNPQAITEDYEQGGYYYFDWENSWCQRRKSDFRFEDCGWR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgcggaagctagcagccgagatcgacaagacgttgaaggcggtggctgtcgga
gttgagaccttcgaagctactttcgacaaattagctcatgcgacgaatgcgacccagaag
gacaagacggagaatgacctcaaagcgcagatcaagaagttgcaaaagtcgagagatcag
atcaaggcgtggatagggaacaatgatatcaaggagaagggcgctttgttagataacagg
aggctgattgagacgcaaatggagcgattcaaagcattagaaaaggagatgaagatgaaa
gcgttctcgaaagaagggctgatcgctcaatcgaaactcgacccagctgagaaggcccgc
cgagatatgatagattgggtaggaaatacgatagacgagctatcgaggcagatcgaactg
actgaagcggaagcggagagcctgcaagtcacgaagaagaagaagtcggggaatgatagg
ttgagcgaattggaggagctgaatgagagacgatcatggcacataagtaaattggagctg
gtcaatcgtatgctagaaaacaattctttgccggtggaagatgtcgagaatgttcaagag
gatatcaaatactttgtcgaggcgaatgctgaagaggactttgactacgatcaaggacta
tacgacgagctcaacttgcaagaagaggaagactatatccatgattacggtcatgttgac
gatctctcgaacgtcgacgacgcatcagtagcagacgtaacggaatcagtcacatccagt
gccgctgcatcggcacctgtgcctaaaacgcctgcgaaagaagaggtgtcttcgacatcg
ggcaagaaaggcactccagcatcgaaagctgcaagtcacgatgagtcaccgagtccagta
tcagccaagaaagtaccctcgagaaaagcgactatggagactaggaaaagcacggagaca
ataccgcccgtacctgttcctcctcctacgacgacgatccccgttccaacgcctaaagct
gccgctttgccaccgatcagatacgccgctgctgccgctgctgctgtagctagctcccct
tccgtggcaagcaccactacggctcaacctgaaacttccccttcgaaggccagagaagct
ttacctgctgctcaattgactgaatccccacacgaagaaccgcctgcaccagcagctgca
ccatcagctaaggtcgagacaccggagaccaaggcgcctagtccagctaaaccggaaggg
cagactaacggccacgcaccacccccgcctcctggtctcgccacgccttcgcccctccct
gcgacgcagactcctgccgttccccctcaatccaccgctacgcccgccccagcgccacca
ggatacgcaccgcaacatgccgagtcgtcgcgagcagcgcaacaaccaccagcatcggct
caacctcagccgcaatctgctcagccgggtgtcatgggtaatctgatgcacagcttcgag
atggccaaggagatgtccaagcgaaggacgaatgacgtgcacgagctaaacaacgctttg
gacggaagttatactaatatcccacaacaattggatgccgagccaccgaggtattatcat
cccaaaaatccaatcaagacaccatcatattacccgcaaacacgtctccctatcctggaa
gacaaatcgatatactcgaggctggatctggatcaactgttctacatattctactatatg
acgggaacatacgagcaatggttagctgccaaagagctgaaacgacaatcgtggagattc
cataaacagtacttgacgtggttccaacgagcgcataacccgcaagcgataacggaagat
tacgaacaaggggggtattattatttcgattgggagaatagttggtgtcagcgaaggaag
agtgatttcaggtttgaggactgcgggtggagataa
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