| Entry |
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| Symbol |
I303_106746
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| Name |
(RefSeq) histone deacetylase RPD3
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| KO |
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| Organism |
kdj Kwoniella dejecticola
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| Pathway |
| kdj03082 | ATP-dependent chromatin remodeling |
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| Brite |
Enzymes [BR:kdj01000]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
28972311 (I303_106746)
Chromosome and associated proteins [BR:kdj03036]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
28972311 (I303_106746)
HDAC complexes
Sin3A-HDAC complex
28972311 (I303_106746)
BRAF-HDAC complex
28972311 (I303_106746)
REST complex
28972311 (I303_106746)
SHIP complex
28972311 (I303_106746)
MiDAC complex
28972311 (I303_106746)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
28972311 (I303_106746)
Heterochromatin formation proteins
Other heterochromatin formation proteins
28972311 (I303_106746)
Chromatin remodeling factors
NuRD complex
28972311 (I303_106746)
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| SSDB |
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| Other DBs |
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| LinkDB |
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| Position |
8:complement(join(1240338..1240915,1240992..1241159,1241275..1241524,1241616..1241850,1241910..1241940,1242000..1242107,1242168..1242242,1242311..1242428,1242532..1242614,1242726..1242771,1242991..1243026))
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| AA seq |
575 aa
MEPILGEAKRRVCYFFDSDIGNYHYGPGHPMKPTRIRMCHSLIMNYGLYKKMEIFRAKPA
TKREMSQFHTDEYVDFLHRINPDNAQQFAKEQVKYNVGDDCPIFDGLFEYSSISAGGSME
GAARLSRDKCDIAVNWAGGLHHAKKAEASGFCYVNDIVLGILELLRYHQRVLYIDIDVHH
GDGVEEAFYTTDRVMTCSFHKYGEFFPGTGEVRDNGIGKGKGYAVNVPLRDGINDENYQS
IFQPVIKRVIEWYQPGAIVLQCGSDSLSGDRLGSFNLSMRGHAACVQYVKSFHLPLLLLG
GGGYTVKSVSRTWAYETGLAAGVELQKNIPNNEYWEYYGPTYELDVRASNMTDQNTPEYL
QKVTESVFEVLRDKNAAPSVPLQDVPKLRHDDEDDNELEDTEDKDVRRPLRLWDKEKQNE
NSLSDSEDEGTGGRRHRQSHKDPASKSHSPKENGKRKRSKTPPTTSVLDGPPHPINPQSS
TTTRNGNSGVDVGQWAQSVQHSESSATTAATGRSTSTTALTARDRIGNGDIEMAEPDSNT
NTTNTNGTATQSPINRISHNPSEQAEQSRERTGAL |
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| NT seq |
1728 nt +upstreamnt +downstreamnt
atggaaccgatcttaggagaggccaagcggcgtgtgtgctatttcttcgactcagatatc
gggaattatcattatggacctggtcatccgatgaaacctactagaatcagaatgtgtcat
tcgctcattatgaactacggtctatacaagaagatggagatcttcagagcgaaacccgct
acgaagcgagagatgtcgcaattccacacagacgaatatgtcgattttctacatcgtata
aatcccgataatgctcaacaattcgcaaaagagcaagtcaagtataatgttggagacgac
tgtccgatatttgacgggttattcgagtacagctcgatatctgctggagggtcaatggag
ggtgcagcgagattatcgagggataaatgtgatattgctgtgaactgggctggagggttg
catcatgccaagaaggcggaagcgagtggattctgctacgtcaacgacatcgtacttggt
atactcgaattgctacgataccaccaaagagttctttatatagatatagatgtgcaccat
ggagacggagtggaagaagcattctacactacggatagagtcatgacatgttctttccac
aaatacggagaattcttccctggaactggtgaggtgagggataatggaataggcaagggg
aaaggatatgcagtcaatgtgcctttacgagacggcataaatgatgagaattatcagagt
atattccaaccggtgataaaacgagtgatagaatggtaccaaccgggagctatcgtactt
caatgcggatctgattccctatcaggcgacagattaggatctttcaatttgtcgatgaga
ggtcatgccgcatgcgtgcaatacgtcaaatcctttcaccttcctctactactcctaggt
ggcggagggtacacagtgaaatcggttagtaggacttgggcatacgaaacgggtttagcg
gctggagttgaattgcagaagaatataccgaataacgaatattgggaatactacgggccg
acatatgaactcgatgttcgagcgagtaatatgaccgaccaaaatacgcctgaatatctg
cagaaggtaaccgagtctgtgtttgaggtgctgcgagataagaacgcagctcctagtgtg
ccactgcaagatgtgccgaaattacgccatgatgacgaagacgataacgagcttgaagac
acagaagacaaggacgtcaggcggccgctgaggctatgggacaaagagaagcagaacgag
aattcgttgagtgattcagaggacgaaggcacgggcggaagaagacatcgacaaagtcat
aaagatcctgcgagcaaatctcattcacccaaagaaaacggaaagaggaaacgatcgaag
acgcccccgacgacatcagtcttagacggtccgcctcacccgataaatccacagtcaagt
acgacaactagaaatgggaatagcggagtagatgtaggacaatgggctcaatctgtacaa
cattcagagtcctcagccacgactgcggctacaggcagatctacaagtacaacagcatta
acagctcgagatcgaattggaaatggggatatagagatggctgagcctgattcgaacacg
aataccaccaataccaacgggactgcaactcaatctccgataaatcggatatcccataac
ccttcagaacaagcagaacaatcgagggaacgcacgggagctttatga |
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