Candidatus Kirkpatrickella diaphorinae: N5W20_00015
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Entry
N5W20_00015 CDS
T09554
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp00521
Streptomycin biosynthesis
kdp00523
Polyketide sugar unit biosynthesis
kdp00541
Biosynthesis of various nucleotide sugars
kdp01100
Metabolic pathways
kdp01110
Biosynthesis of secondary metabolites
kdp01250
Biosynthesis of nucleotide sugars
Module
kdp_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
N5W20_00015 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
N5W20_00015 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
N5W20_00015 (rfbC)
Enzymes [BR:
kdp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
N5W20_00015 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UYH51313
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All DBs
Position
967..1524
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AA seq
185 aa
AA seq
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MKVTRLDIPDVILVTPPKFGDARGFFSETYNAARYEEAGITLPFVQDNQSLSRQKGVVRG
LHCQLAPYEQGKLVRCTQGAIWDVAVDARSGSPTYGKWVGAELSEENWSQLWVPPGFLHG
FMTLTDHVMVQYKCTSVYDKASERAVIWNCPHLGIKWPLPTSDIVLSEKDREAPHFTEVK
NWFKY
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcacacgactggacatccccgatgtcatcctcgtcacgccgccaaaattcggc
gatgcgcgcgggtttttctccgaaacctacaatgcggcacgttatgaagaggccgggatc
acgcttccttttgtgcaggataatcaaagcctgtcgcgccagaaaggcgtggtgcgcggg
ctgcattgccaactggccccttatgagcagggtaaacttgtgcgctgcacacagggcgcg
atctgggacgtggcggtggatgcgcgctctggctccccgacatacgggaaatgggtcggc
gcggaattatcagaggaaaactggtctcaactctgggtgccgccggggtttctacatggt
ttcatgactctgacggatcacgtgatggtgcaatataagtgcacctctgtctatgacaaa
gcttctgaacgtgccgttatctggaattgcccgcatctcggtatcaaatggccgttgccg
acctccgatattgtcctgtcggaaaaggaccgggaagcgcctcatttcacggaagtcaaa
aactggttcaaatattga
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