Candidatus Kirkpatrickella diaphorinae: N5W20_01195
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Entry
N5W20_01195 CDS
T09554
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp03030
DNA replication
kdp03410
Base excision repair
kdp03420
Nucleotide excision repair
kdp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N5W20_01195 (polA)
03410 Base excision repair
N5W20_01195 (polA)
03420 Nucleotide excision repair
N5W20_01195 (polA)
03440 Homologous recombination
N5W20_01195 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdp03032
]
N5W20_01195 (polA)
03400 DNA repair and recombination proteins [BR:
kdp03400
]
N5W20_01195 (polA)
Enzymes [BR:
kdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N5W20_01195 (polA)
DNA replication proteins [BR:
kdp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
N5W20_01195 (polA)
DNA repair and recombination proteins [BR:
kdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
N5W20_01195 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N5W20_01195 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
Motif
Other DBs
NCBI-ProteinID:
UYH51526
LinkDB
All DBs
Position
244470..247244
Genome browser
AA seq
924 aa
AA seq
DB search
MEQEKHLILVDGSGFIFRAFHALPPMHSPDGTPVNAVYGFTNMLSRLMREHVGTHLAVIF
DAGRQTFRNDIYPAYKAHRPPAPEDLVPQFALIREATKAFNVPSIELPGWEADDLIASYA
GVIALEGGRCTIVSSDKDLMQLVTEKVQMLDPIKQRPIGVEEVLTKFGVPPERVVDVQAL
MGDSTDNVPGVPGIGPKGAAQLVAEFGRLEDVLTAAPGMKPSKRRDALIEHAENARLSLK
LVTLARDVALPEPIEALGCRDPSGDMLGGFLAQMGFNSISQRLGLRHVARPTPSPAAPDG
DAATRDATAPTASPVKQPDFGPYETVTTTTQLESWVQRIKAEGYVAVDTETDSLQPRRAA
LIGISLAVRAGEAAYIPLRHQGDLENLVPPQLETAQVLAALTPVFHDDAILKIFQNAKYD
LLVFQNAGVTGIAPIDDTMLLSYAQSAGAHGHGMDELSLLHLGHRPITYDEVTGTGRQRI
PFAHVSVDKATSYAAEDADVTFRLWLKLKAMLVQNRAVRIYETMERPLIPVLQKMEWAGI
KIDVAELQRLSTDFAARMKVMEAEIHQLVGRDFNIGSPKQLGEILFDEMNLSGGKRTKAG
AWGTDSSVLQELADQGHALPQHILAWRQLAKLKSTYTDALLEQRDPKTARVHTSYHMAGT
TTGRLSSNDPNLQNIPIRTEEGARIRHAFIAEKGRKLVSADYSQIELRLLAAVANIPTLQ
EAFALGQDIHARTASEVFNVPVEGMDPLTRRRAKAINFGIIYGISAFGLARQLGIPQNEA
RHYIATYFERYPGIKTYMDRTKEEAREKGFVETPFGRRCYVPGITEKNGARRAYAERQAI
NAPLQGGAADIIKMAMISVDRQLSDNDFDAQLLLQVHDELVFEVAADKADMLAGFLRETM
SSVADIGVKLVVETGIGDNWAEAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagaaaaacacctcattctggtcgatgggtcgggcttcatcttccgggctttt
catgccctgccaccgatgcacagcccggatggcacgcctgttaatgcggtttacggtttt
accaatatgctctcccgcctgatgcgagagcatgtcggcacacatctggctgtcattttt
gacgcggggcggcagaccttccgcaatgacatctaccccgcttataaagcgcatcgtccc
cccgccccggaggaccttgtcccgcaattcgccttgatccgggaagcgacaaaggccttc
aatgtcccatccattgaattgccaggctgggaggcggatgatcttattgcttcttatgcc
ggggtgatcgcccttgagggcggtcggtgcacgattgtttcctcagataaagatctgatg
cagctcgtgacggaaaaagtgcagatgcttgaccccatcaagcagcgcccgatcggggtg
gaagaggtccttaccaagttcggtgtaccgccggaacgcgtcgtggacgtgcaggccctg
atgggggattcgaccgataatgtgccgggcgtgcccggtatcggcccgaaaggtgcagcc
caacttgtcgctgaattcgggcgtctggaagatgtgctgacggccgcgccgggtatgaag
ccgtcaaagcgccgtgatgcgctgatcgaacatgcggaaaatgcacgcctctccctcaaa
ctggtgactctggcacgcgatgtggcgctgccggaaccgattgaggcgctgggctgtcgc
gacccatcaggggacatgttgggtggtttcctggcgcagatggggttcaactccatcagc
cagcgccttggactgcgccatgttgcgcgaccaaccccttcgccagccgcgccggatggc
gacgccgcaacgcgagacgcaacagccccaacggcttcacccgtgaagcagccggatttc
ggcccctatgaaacggtcacaacaaccacgcagcttgaaagctgggttcaacgcattaag
gctgagggctatgttgccgtcgatacggagacggatagtcttcaaccgcgacgggcggcg
ctcatcgggatttctctggcggtgcgtgcgggggaggcggcttatattccgctacgccat
cagggtgaccttgaaaatctggtgccacctcaacttgaaacggcacaggttctcgccgcg
ctgacgccggtcttccatgatgatgcgatcctgaagatttttcagaatgcaaaatatgac
ctgctcgtttttcagaatgccggtgtgacgggtatcgcgcccattgatgacacaatgctg
ctctcctacgcccaatcggcgggcgcgcacgggcatgggatggatgagctgtccctcctc
catctgggtcatcgcccgatcacttatgatgaggtgacgggcacggggcggcagcgcatt
ccgtttgcgcacgtctctgtcgataaggcgacgtcctacgcggcggaagacgcggatgtg
acattcagattatggctgaagctcaaggcgatgctggtgcagaatcgcgccgtgcgcatt
tatgagacgatggagcggccgctcatccctgtccttcagaaaatggaatgggccggcatc
aaaattgatgtcgctgaacttcaacgcctctctactgattttgccgcgcgtatgaaggtg
atggaagcggaaatccatcaattggtggggcgggacttcaatatcggttcgcccaagcaa
ttgggagagatccttttcgatgaaatgaatctctcgggcggcaaacgcaccaaggcgggg
gcctggggtacggactcctccgtcttgcaggaactggcggatcagggtcacgcgcttccg
caacatatcctcgcctggcggcagctcgcgaaactgaaatcgacttatacagacgcgctt
ttagagcagcgggacccgaagacggcgcgcgtgcacacatcctatcatatggcaggcacg
acaacaggtcgcctttcctcaaatgatccgaacctgcagaacatcccgatccgcacggag
gaaggggcgcgcatccgccacgctttcatcgcggagaaggggcgtaagcttgtctcggcg
gattactcccagattgaacttcgcctcctcgctgccgtggccaacatcccgacccttcag
gaagctttcgcgctagggcaggatattcacgcccgcacggcttcggaagtcttcaatgtg
cccgttgaaggcatggacccgctgacccgtcgcagggccaaagcgatcaatttcgggatc
atttacggcatcagcgcgttcgggctggcgcgccagttgggcatcccgcaaaatgaggcg
cggcattatatcgcgacgtattttgaacgttatccgggcattaaaacctatatggaccgg
acaaaagaggaagcgcgggagaaaggctttgtcgagacgccattcggtcgccgatgttac
gtccccggcatcactgagaaaaatggcgcgcgacgcgcttatgcggaacgtcaggccatc
aatgcgccccttcagggaggtgctgcggacatcatcaaaatggccatgatctcggtggat
cgtcagttgagcgacaatgattttgatgcgcaacttctgctgcaagtgcatgatgagctc
gttttcgaagtggctgcggataaagcggatatgttggcaggcttcctccgtgagacgatg
agcagcgttgccgatattggggtgaaactggttgtcgagaccggtatcggtgataactgg
gccgaggcgcattga
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