Candidatus Kirkpatrickella diaphorinae: N5W20_02040
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Entry
N5W20_02040 CDS
T09554
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp00470
D-Amino acid metabolism
kdp00550
Peptidoglycan biosynthesis
kdp01100
Metabolic pathways
kdp01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N5W20_02040
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N5W20_02040
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
N5W20_02040
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kdp01011
]
N5W20_02040
Enzymes [BR:
kdp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
N5W20_02040
Peptidoglycan biosynthesis and degradation proteins [BR:
kdp01011
]
Precursor biosynthesis
Amino acid ligase
N5W20_02040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
B12-binding
Motif
Other DBs
NCBI-ProteinID:
UYH51677
UniProt:
A0ABY6GJG9
LinkDB
All DBs
Position
complement(458914..459861)
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AA seq
315 aa
AA seq
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MSLHVAILHGGISHERDVSLRGGRAVADGLQAHGYATTLIDVGADIAAMIQEIRACTPDV
VFNNLHGPLGEDGAIQGVLEWLDLPYTHCDIRTSSLAMNKVASRQIFAAAGIPIAPGKLL
TPAELAAAHPFETPYVVKPVAEGSSFGVHVIKGDDAATQRRDIASGWAYGDILLAEAFIP
GRELTVSVLGERPLTVTDIVAESAQDGFYNYHAKYAAGGSRHSLPADIPGRIFEDALRYA
REAHAALGCRGATRADFRYDESRSESGLVILEVNTQPGMTPTSLLPEQAAHCGMDFSQLC
DWIVQEAWGRRKVRG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagccttcacgtcgcgatcctgcatggtggcatcagccatgagcgagatgtcagcctg
agaggcggccgcgccgtggcggacggcctgcaagcacatggttatgccacgaccctgatt
gatgtcggtgcagatattgccgccatgatccaggaaattcgggcctgcacgccggatgtg
gtcttcaataaccttcatggcccactcggggaggatggcgccattcagggcgtgttggaa
tggctggacctgccttacacgcattgcgacatacgcacctcctctctcgccatgaataaa
gtcgcctcgcgccagattttcgcggcggctggcatccccatcgcaccgggcaaactcctc
accccggcagaacttgccgccgcacatccgttcgaaacgccttatgttgtcaaacccgtc
gcggaaggctcgtctttcggggtgcatgtcatcaaaggtgatgatgcagcgacacagcga
cgggatattgcgtctggctgggcctacggtgacatccttctggctgaagccttcatccca
gggcgggaattgactgtcagcgtgctgggcgagcgccccctcaccgtcacggatattgtg
gctgagtccgcgcaggacgggttttacaattaccacgccaaatatgctgccggtggatca
cggcacagtttgccagccgacatacccgggcggatttttgaggatgcgctgcgctatgct
cgagaggcccacgcggctctgggctgccgcggcgccacgcgcgcggacttccgatatgat
gagtcgcggtcggaaagcggactggtcattcttgaagtcaacacgcaaccgggcatgacc
ccgacctcgttattgcccgagcaggcggcccattgcgggatggatttttcccaactttgc
gactggatcgtgcaggaggcctggggtcgacgcaaggtgcggggatga
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