Candidatus Kirkpatrickella diaphorinae: N5W20_02065
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Entry
N5W20_02065 CDS
T09554
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp00470
D-Amino acid metabolism
kdp00550
Peptidoglycan biosynthesis
kdp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N5W20_02065 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N5W20_02065 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kdp01011
]
N5W20_02065 (murD)
Enzymes [BR:
kdp01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
N5W20_02065 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
kdp01011
]
Precursor biosynthesis
Amino acid ligase
N5W20_02065 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
CbiA
2-Hacid_dh_C
Spo7_2_N
MeaB
Motif
Other DBs
NCBI-ProteinID:
UYH51682
LinkDB
All DBs
Position
complement(464537..465913)
Genome browser
AA seq
458 aa
AA seq
DB search
MTQPFPSTLFKDQQFLVVGLGRNGFAAVNALLGMGARVTAWDDRQDIDRSYTHPRLTYAS
PTTLKGFDALILSPGIPHHLPSPHPLAVLARREGVSILSDAEMLYRAVKSQGAKARFVSV
TGTNGKSTTTALIAHILAHAGFKVAAGGNLGPAALALPLLDDRGVYVIEMSSYMLERLDS
FHADAACLLNLTPDHMERHGDIHHYAAAKAHVFDHMTAADRLIVSIDDAECRDIYEKLRA
RGAHPRALSLHQPADLTPALLDLSKAQSLPGAHNMQNALAACEICRFLGVTEEKILAGLN
SFPGLPHRQEIVARIDGVTFINDSKATNAESAAKALQSYDRVIWIAGGQAKEGGITSLSP
LLNRVTKAFLIGEDASKLAGTLEANKVAWENCTTLERAVSQAFAAAKATRTDVILLSPAC
ASFDQFAHFEARGTAFRELAQSLLAPAKFSAWAEGEKS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgacccagccatttccctccacgctcttcaaagaccagcaatttctggtcgtcggtctc
ggcagaaacggctttgccgccgtcaatgccctgctcgggatgggcgcgcgggtcacggcc
tgggatgatcgtcaggatatcgaccggtcatacacgcatccccgcctgacatatgcgtcc
ccgaccaccctcaaagggtttgacgcgcttattctctcgcccggcatcccgcatcacctc
cctagcccccaccctttggcggtgctggcgcggcgggagggggtttccatattgtcggat
gccgagatgctgtatcgggccgtgaaatcacagggcgcgaaagcacgattcgtttctgtt
accggcacgaatgggaagtcgacgacgacggccctcatcgcccacatcctcgcccatgcc
ggttttaaagtggcggccggtggcaatctcggccccgccgcgctcgcgcttccccttctg
gatgatcgaggcgtctatgtcattgagatgtcttcctacatgcttgagaggctggacagc
ttccatgctgacgcggcctgcctgctgaacctgacgcccgaccatatggagcgccacggc
gacatccatcattatgccgcggcgaaggcgcatgtttttgaccatatgacggcagcggat
cgcctgattgtcagtattgatgacgcggaatgtcgggatatttatgagaagctccgtgcg
cgcggcgcgcatccacgcgcgctctctttgcaccagcccgctgatctgaccccggccttg
ctggatttgtcaaaggcacaatctttgccgggggcgcacaacatgcagaatgccctcgcc
gcctgtgagatttgccgcttcctcggcgtaacggaggagaaaattctggcggggctcaac
agcttccccggccttccccatcggcaggaaattgtggcccgcattgatggcgtgactttc
atcaatgacagcaaggcaacaaatgcggagtcagcggccaaggcattgcaatcttatgat
cgcgtcatatggatcgcgggaggacaggccaaggaaggcgggatcacgtcgctctctccc
ctcttaaatcgcgtcacaaaagctttcctcatcggtgaggatgcctcgaaacttgccggg
acccttgaagcaaacaaggtggcgtgggaaaactgcaccacgctggaacgcgccgtcagc
caggcttttgcagcggcgaaggcgacccggacggacgttattttactatcccccgcctgc
gccagcttcgaccagttcgcgcattttgaagcacgcggcaccgcattccgggaactcgcg
caatcgcttcttgcgcccgcaaaattttcggcatgggccgaaggtgaaaagagctga
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