Candidatus Kirkpatrickella diaphorinae: N5W20_02175
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Entry
N5W20_02175 CDS
T09554
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdp03032
]
N5W20_02175 (ihfB)
03036 Chromosome and associated proteins [BR:
kdp03036
]
N5W20_02175 (ihfB)
03400 DNA repair and recombination proteins [BR:
kdp03400
]
N5W20_02175 (ihfB)
DNA replication proteins [BR:
kdp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
N5W20_02175 (ihfB)
Chromosome and associated proteins [BR:
kdp03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
N5W20_02175 (ihfB)
DNA repair and recombination proteins [BR:
kdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
N5W20_02175 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
TetR_C_30
NNH1
Motif
Other DBs
NCBI-ProteinID:
UYH51700
LinkDB
All DBs
Position
487215..487499
Genome browser
AA seq
94 aa
AA seq
DB search
MTRSELIALLSEAYPQLTTRDIERIVQTLFSEIVSALARGDRVELRGFGAFGVKKRGARL
GRNPKTGEAVEIDQKYVSFFKTGKELRERINAKG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgacgagatctgagcttatcgcactgctgagtgaagcatacccgcagcttacaacccga
gatatagagcgcattgtgcagacgcttttttccgagattgtttccgcccttgcacgcggg
gaccgggtggaactgcgcggtttcggggcttttggcgtcaaaaaacgcggtgcccggctg
ggtcgtaatcccaaaacgggtgaggccgtcgaaatcgatcaaaaatatgtctcatttttc
aaaaccggaaaagaactccgggagcgtatcaacgccaaaggttga
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