Candidatus Kirkpatrickella diaphorinae: N5W20_02420
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Entry
N5W20_02420 CDS
T09554
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp03030
DNA replication
kdp03430
Mismatch repair
kdp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
N5W20_02420 (dnaE)
03430 Mismatch repair
N5W20_02420 (dnaE)
03440 Homologous recombination
N5W20_02420 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kdp03032
]
N5W20_02420 (dnaE)
03400 DNA repair and recombination proteins [BR:
kdp03400
]
N5W20_02420 (dnaE)
Enzymes [BR:
kdp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
N5W20_02420 (dnaE)
DNA replication proteins [BR:
kdp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
N5W20_02420 (dnaE)
DNA repair and recombination proteins [BR:
kdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
N5W20_02420 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
RMI2
T2SSK
HROB
Motif
Other DBs
NCBI-ProteinID:
UYH51743
LinkDB
All DBs
Position
536288..539710
Genome browser
AA seq
1140 aa
AA seq
DB search
MSHADFVHLRNHSAYSLSQGAIRIPDLVDLAVESAMPALALTDTGNLFGALEFSQYAVKK
GVQPIIGCQLSLTLDDPAATAQLSETLVLLARNEKGLENLQFLSSEGFLTSDPGDPTLSL
EAICARAEGLFLLTGGTRGRLFRLLAAGMEDEATALLQTLTSHFKDNMAIELHRHGHAQE
QAVEPGLVALADRFSLPLVATNECFFARPQMYEAHDALLCIAQGRTMAEDDRWRVTDQHW
FKPPSEMRKIFADLPEACDNTLMIARRCAVAVDTRDPLLPVCPKVDKGANEDETLRKMAR
EGLEARLARRQLSAEKRALYVERLETELDIIQSMGFPGYFLIVADFIQWAKSHDIPVGPG
RGSGAGSLVAWALTITDLDPIPFNLLFERFLNPERVSMPDFDIDFCQDRRDEVIRYVRGE
YGGERVAQIITFGKLQARAAVRDVGRVLGLPFGMVNRVAELIPNNPAKPVTLSQAIDGEP
RLQEMRDNDETLRRLLEIALQLEGLFRHASTHAAGVVIGDRPLVELVPLYRDPKSDMLVT
QFNMKFVEQAGLVKFDFLGLTTLTILKRGVRFLHQQGIDVDITDIPLDDAPTYAMLARGD
SGGVFQFEGAGMRDVLKQMRPTRFEDLIAAVALYRPGPMANIPDYCLRKHGADWAPPHED
IRDILEETYGIMVYQEQVMQIAQKLAGYSLGAADLLRRAMGKKIRSEMDTQREIFVAGAT
ARGVEAGQAAEIFDLMARFADYGFNKSHAAAYALVSYQTAWMKANHPVAFIAGCMSLARE
KTEKLAALCQEARHMGISVLPVDINRSEADFSIEKQKDGSYAVRYALAAVKRVGFAAMET
LVQARGDRAFRDIADFTARCDARALNKAQIENLAKAGAFDSLHPDRAAVFASAETIMRRS
QSQTQEAASGQIGLFGGAPEADDLRLAHVKPWTAFERLASEAEAVGFHMTGHPLDAYLSV
IKRTKALTSASLAAAAAANPGRVRIAGCVVDKKERPTRSGSKMAWLRLSDPTGGCEVTLF
SEVLNRCRDLLVPGRAVMVTADLRQDGEALRLTATEVMDLEDAAAQHAGEMRVWVSDIAA
IEEIKSVLEQAKGGRGKVVLVPVLDDLRAVDITLPASYRVTPRMGERIDAVRGVERVDHL
NT seq
3423 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgccgatttcgttcacctccgtaatcactctgcctactccctcagtcagggg
gcgattcggataccggatctggtcgatctggccgtcgaaagtgcgatgccggcgctggcg
ctgacggatacgggcaatctcttcggcgccctcgaattttcgcaatatgcggtcaaaaag
ggcgtgcagccgattatcggatgtcagctctccctcacattggacgacccggccgcgacg
gcgcaactctcagaaacgctcgtcctccttgcccgcaatgaaaaagggttggagaatctc
caattcctctcctccgaaggctttttgacgtcggaccctggtgacccgactctatcgctg
gaggcgatctgcgcccgcgctgaagggttatttctgctgacggggggcacgcgcgggcgg
cttttccgcctgcttgcggcgggcatggaagatgaggcgacggcgctcctccagaccctc
acatcgcactttaaagataatatggcgatcgaactccatcggcatggccacgcgcaggag
caggcggtggagccaggtctggtcgccctggcggaccgattcagcctgccgcttgtcgcc
acgaatgagtgttttttcgcgcgtccgcaaatgtatgaggcccatgatgccttactttgc
atcgcgcaagggcgcaccatggcggaggatgatcgctggcgcgtaacggaccagcattgg
ttcaaaccaccgtctgaaatgcgtaaaatcttcgcggacctccccgaggcttgcgataat
acgctgatgatcgctcgccgctgcgccgtggcagtcgatacgcgtgacccgctcctgcct
gtctgccccaaagtggataaaggcgccaatgaggatgagacgctccgcaaaatggcgcgg
gaagggctggaagcgcgtctggcacgccgacaattatcagcggaaaaacgcgccctttat
gttgagagattggagacggaactcgatattatccaatccatgggtttcccgggttacttt
ctgatcgttgcggacttcatccaatgggcgaaaagtcatgacatcccggttgggccgggg
cgtggttcgggcgcggggtcactcgtggcgtgggctttgacgatcaccgatctcgacccc
attccattcaatctcctctttgaacgcttcctcaaccctgagcgcgtttccatgccggat
ttcgatatcgatttctgtcaggaccggcgtgatgaggtgatccgctatgtgcgcggggaa
tatgggggggaacgcgtcgcgcagatcatcacgttcggtaaattacaggcgcgtgcggcg
gtgagggatgtcgggcgcgtgcttggcctgccattcgggatggtcaaccgcgtcgcggag
ctgatcccgaataacccggccaaacccgtcacattgagtcaggccattgatggcgagccg
cgcctgcaggaaatgcgcgataatgacgagacattgcgccgcctgcttgaaatcgcgctc
caattggaggggctgttccgccatgcctcgacccatgcggccggtgtcgtgatcggggat
cgccccctcgttgaactcgtcccgctttaccgagacccgaaaagcgacatgctcgtcacg
cagttcaacatgaaatttgttgagcaggccgggttggtgaaatttgatttccttggcctg
acaacgctgaccatcctcaaacgcggtgttcgctttctgcaccagcaggggatcgacgtg
gatatcaccgacatccccctcgatgatgcaccgacttacgccatgctggcccgtggcgat
tccggtggcgtgttccagttcgaaggcgcggggatgcgcgacgtgctgaaacagatgcgc
ccgacaagatttgaagatctcattgccgccgtggcgctctaccgtccgggcccgatggcc
aatatcccggattactgcctgcgcaagcacggtgccgactgggccccgccccatgaggat
attcgcgatatcctcgaagagacatacggcatcatggtgtatcaggaacaggtgatgcag
attgcgcagaaactggcgggatacagcctcggcgccgcggaccttctgcggcgggccatg
gggaaaaagatccggtcggaaatggacacgcagcgggagattttcgtcgccggggcgaca
gcgcgcggcgttgaggcgggacaggctgctgaaatcttcgatttaatggcgcgatttgcg
gattacggctttaataaatctcacgcggccgcttacgcactggtttcctatcagacagca
tggatgaaggcgaaccaccccgtggccttcatagcgggatgcatgtcactcgcgcgggaa
aaaacggagaagctcgcggctttgtgtcaggaagcgcgccatatgggcatttccgttttg
cccgtggatattaatcgctccgaagctgatttctccattgagaagcagaaagatggcagt
tacgccgtgcgttacgcccttgcggcggttaaacgcgtcgggttcgcggcgatggagacg
cttgttcaggcccgtggggatcgggctttccgggatattgcggatttcacggcgcgttgc
gatgcgcgcgcgctgaataaggcgcagattgagaatctggcgaaagccggggcgtttgac
agcctccacccggaccgcgccgccgtctttgccagtgctgagacgatcatgcggcggagc
cagtcccagacgcaggaggcggcgtccggtcagatcgggttgtttggcggcgcgccggag
gcggatgacctgcgtctggcccatgtcaaaccctggacggcgtttgaacgcctggcttct
gaagccgaggcggtgggtttccacatgaccggccacccattggatgcctacctctccgtc
atcaagcgcacgaaagcgctgacatctgccagcctcgccgccgcagcggcggccaatccc
gggcgggtgcggattgcgggatgtgttgttgataaaaaagagcgcccgacgcgcagcggc
agtaaaatggcgtggctccgcctttccgacccgacaggagggtgtgaggtcacgttattt
tccgaagtgctgaatcgctgccgtgacctgctggtgccggggcgggcagtgatggtgacg
gcagacttgcggcaggatggcgaggccctgcgcttgaccgcgacggaggtcatggacctt
gaggatgccgcggcgcaacatgctggtgaaatgcgcgtctgggtcagtgacatcgcggcg
attgaagaaatcaagagcgtgttggaacaggcaaaaggcgggcgcggcaaagttgtgctc
gtgcccgtattggatgatctgcgcgctgtcgacatcaccttacccgcctcttatcgcgtc
acaccccgcatgggggagcggatcgatgcggtgcgcggggtggagcgggttgatcacctg
tag
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