Candidatus Kirkpatrickella diaphorinae: N5W20_04070
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Entry
N5W20_04070 CDS
T09554
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kdp03016
]
N5W20_04070 (miaB)
Enzymes [BR:
kdp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
N5W20_04070 (miaB)
Transfer RNA biogenesis [BR:
kdp03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
N5W20_04070 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UYH52042
LinkDB
All DBs
Position
904501..905889
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AA seq
462 aa
AA seq
DB search
MTDHPATTTKLKNLHVITWGCQMNVYDSARMEDVLRPLGYRPVSQVEHADMVILNTCHIR
ERATEKVFSELGLLKKIREDRLAQGHDRMVIAVAGCVAQAEGAEIIHRAPYVDIVFGPQT
YHRLPEMVARAARAGGHVIETDFPVDMKFDFLPAEAAPQTPENLSAFLTIQEGCDKFCSF
CVVPYTRGAESSRNVASILTEARQMARNGVRELTLLGQNVNAYHGLDAQGATADLPQLVR
ALSRIEGIARIRYTTSHPRDVTQSLIDAHRDEAALMPFLHLPVQSGSDRVLKAMNRGHTA
DEYRDIIRRFRAARPDLSISSDFIVGHPGETDADFEATLALIRDVGFAQAYTFKYSPRPG
TPASAADFQVDEAVKDARLQIVQKLIRAQQDAFNGALVGRDVAVLLTHKGRKPGQVVGRS
PYQQPVIIDAPEHMIGRIVTVRILHTLTNSLAGELIRETICA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaccccgcgacgacgacaaagctgaagaacctgcatgtcatcacttggggg
tgtcagatgaatgtctatgacagtgcgcgcatggaagatgttctccgcccgctcggctat
cgccctgtgtcacaggttgagcatgctgatatggtcattctcaatacctgccacatccgg
gaacgtgcgacggaaaaagtgttttcagagcttggcctgctgaagaaaatccgtgaggac
cgccttgcccaggggcatgatcgcatggtgatcgccgtggcgggatgcgtcgcccaggcg
gaaggggctgagattattcatcgcgccccctatgttgatatcgtattcggccctcagact
tatcaccgcctgcccgaaatggtcgcgcgcgcagcccgcgccgggggccacgtcattgaa
actgattttccagtcgatatgaagttcgacttcctaccggcggaagccgcgccgcaaacg
ccggaaaatctctctgctttcctgacgattcaggagggatgcgataaattctgttccttc
tgcgtcgtgccttatacgcgcggggctgaatccagccgcaatgtggcatccatcctgacg
gaagcccggcagatggcccgcaatggcgtacgggagctgacccttctgggccagaacgtc
aatgcctatcacggtctcgacgcgcagggtgcaacggcggatctgccccaacttgtccgg
gccttatcccggattgagggaattgcccgcatccgttacaccacctcccacccgagggat
gtgacgcaaagccttattgatgcccatcgggatgaggcggcgctgatgccattcctgcat
ttaccggttcaatcagggtccgaccgtgtcctcaaagcgatgaatcgcggccatacggcg
gatgaatatcgcgacatcatccgacgcttccgcgcggcaaggccggacctctctatttcg
tccgattttatcgtcggccacccgggtgagacggatgctgattttgaggcgactctggcg
ctgatccgtgatgtcggcttcgcgcaggcttacacattcaaatattctccgcgccccggc
acgcctgcatccgcggcggatttccaggtggatgaagcggtcaaggatgcgcggttgcag
atcgtgcagaaactgatccgcgcgcagcaggatgccttcaatggggcgctggtcgggcgg
gacgttgccgtgctgctgacgcataaaggtcgtaaacccggacaggtcgtaggacgttca
ccctaccagcaacccgtcattatcgacgcgccggaacatatgatcgggcgtatcgtaaca
gttcggattctgcataccctcaccaactccctggcgggggaacttatccgggagactatc
tgcgcttga
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