Candidatus Kirkpatrickella diaphorinae: N5W20_04180
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Entry
N5W20_04180 CDS
T09554
Name
(GenBank) DUF374 domain-containing protein
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp00540
Lipopolysaccharide biosynthesis
kdp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
N5W20_04180
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kdp01005
]
N5W20_04180
Enzymes [BR:
kdp01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
N5W20_04180
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
N5W20_04180
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
N5W20_04180
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
N5W20_04180
Lipopolysaccharide biosynthesis proteins [BR:
kdp01005
]
Lipid A
N5W20_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
DUF374
TAL_effector
Motif
Other DBs
NCBI-ProteinID:
UYH52059
LinkDB
All DBs
Position
928637..930595
Genome browser
AA seq
652 aa
AA seq
DB search
MSKRRLLSRKILPSVARAYLGLALRTTRWRIIGPHAGRNVLIQIPASRHPGAIVAFWHRN
LLLLPALWKWARTRNGALRLNVLISRNRDGRLIRRTVAPWDIIGIEGSSNKRGQNKGGAR
ALRAGVKALEGGALLAITPDGPRGPAENVQAGATALGRLSRRVSVPVGGACRAVRLKTWD
RMRVPLPFGRGYLCHGTPLPSGASTELLAQQIAAADQRAAHAYRASRHYVIDLIWPWVGL
AASIYLRRLAARRVQSGKEIAERLEERFGRSSVPRPGGDILWLHAASVGEVRSILPLLQR
FLDAWPRVTILITTATVTGCETVARHRERLTQAHRKRLIHQFAPYDVVRATRRFLNHWRP
VGLLLTDSELWPGWLRQCSRRGVPVGLLNARLSQKSFSRWRQTALLTRPVFERLAFVASR
GADDAAQYDRLGAKNVFCVGDLKELAPASAVDEEALNAMRHALKDRTVLTVSSTHQGEEP
IIIDAIALARRKVKNLLGIIIPRHPERGAEVAELGNPAFPRRSQGALPGEEDAIWVADTL
GELALFYQLADFIFIGHSLLPHGGGHNPYEALHAGAPCATGPYRANFLEAYQQLGTRFTT
VNDAQSLAAWVSQETNPSQPSRPDQNGDENQSDRFVVLANTLVARVSAMTGL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacgccgcctgctgtctcgaaaaattctgccttccgtcgcgcgtgcctatctc
ggtttggccctcagaacgacgcgctggcgcattatcgggccgcatgcgggccgaaacgtg
cttattcagatcccggcctcacgccatccgggagcgatcgtcgctttctggcaccggaat
ctccttctcctcccggctttgtggaagtgggcgcgcacccgaaatggcgcgcttcgcctc
aatgtgctgatcagtcgcaaccgtgatgggcgcctcatccgccgcacggtcgcgccatgg
gacattatcggcattgaaggttcaagcaataagcgcggacagaataaagggggtgcccgc
gccctgcgtgcaggcgtgaaagcgttggagggcggcgctttattggccatcacaccggat
ggcccgcgcggcccggcggaaaacgtgcaggccggggcgacggcgctgggtcggctctca
cgtcgtgtcagcgtaccggttgggggcgcctgccgcgccgtgcggctcaagacatgggac
agaatgcgcgtcccccttccctttggtcgcggctatctttgccatggcacgccgctcccc
tcaggtgcctccaccgaacttctcgcgcagcagatcgcggcggcggatcagcgggccgca
catgcttatcgcgcgagccgtcattatgtgattgacctgatctggccctgggtcggcctc
gccgcctccatctatctgcgtcgcctcgccgccaggcgtgtccagtccggcaaggaaatc
gccgagcggctggaggaaaggttcggccggtccagtgtcccgcgccctggcggggatatt
ttatggctccatgccgcgagcgtcggtgaagtcagatccatcctgcccctgctgcaacga
ttccttgatgcctggccacgcgtcaccattctgatcacaaccgcgaccgtgaccggctgt
gagaccgtggcgcgtcatagggagcgcttaacccaagcccatcgcaagcggcttatccat
caattcgcgccctatgatgtggttcgcgcaacgcggcgattcctcaatcactggaggccg
gtcgggcttcttctgacggatagtgaattatggccgggttggctgcggcaatgcagccgg
cgcggggtgccggtcggattgctgaatgcgcggctttctcaaaaatccttttcgcgttgg
cggcagaccgccctcctgacgcgccctgtctttgagcgccttgctttcgtcgcgtcacgg
ggtgcggatgacgccgcgcaatatgaccgcctcggcgcgaaaaacgttttctgtgtcgga
gatctgaaggaactcgcccccgcttccgccgtcgatgaggaagcgctcaacgcgatgcgc
catgctttaaaagatcgcacggtgcttaccgtgtcctcgacgcatcaaggggaggagccg
atcattatcgacgccatcgcgttggcgcggcgtaaggtgaaaaacctcctcggcattatc
atcccgcggcaccctgaacgcggcgcggaagttgctgaactcggcaatccggccttcccc
cgacgctcccaaggcgcattaccgggggaagaggatgccatctgggtggcggacacgctg
ggtgaactggcactcttctaccaattggctgatttcatttttatcggtcattcccttctt
ccccatggtggcggccataacccctatgaggcgctgcatgccggcgcaccctgcgccacc
gggccctaccgcgccaattttctggaggcttatcagcagctcggcacgcgcttcaccacc
gtcaatgatgcgcaaagccttgcggcatgggtcagccaggaaaccaacccgtcacaacca
tcccgcccggatcagaacggcgatgaaaaccagtcagatcgtttcgtggtcctcgccaat
acacttgttgcgcgtgtcagtgcgatgaccggcctatga
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