Candidatus Kirkpatrickella diaphorinae: N5W20_04375
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Entry
N5W20_04375 CDS
T09554
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp00300
Lysine biosynthesis
kdp00470
D-Amino acid metabolism
kdp01100
Metabolic pathways
kdp01110
Biosynthesis of secondary metabolites
kdp01120
Microbial metabolism in diverse environments
kdp01230
Biosynthesis of amino acids
Module
kdp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
N5W20_04375 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
N5W20_04375 (lysA)
Enzymes [BR:
kdp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
N5W20_04375 (lysA)
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Paralog
Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF748
Motif
Other DBs
NCBI-ProteinID:
UYH52095
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All DBs
Position
966684..968009
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AA seq
441 aa
AA seq
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MSNLPPSLVEILQSRPWLRYDTDAALIFDGVRLQDIAAQYDTPCWVFSASILRARARALK
AAFSGINQPISMHYAVKANDHRATLAILQREGFGADVVSGGELRKAIAAGIVPFDIVFSG
VGKKDAELTLAIETEIGVINVESREELGRLTSLATRLGKRPKVALRVNPHIDAGTHDKIS
TGREGDKFGIDWREAPTLSRMAARDPHLDFIGLAAHIGSQITSIAPFEAACQRLAGMITD
LRADGIAVKHVDCGGGLGICYHQEAPPDITEYARVIANHLGTLNVAISIEPGRWLSGPTG
ILLTRVIDVKAQPAPRSDFVFIDAAMNDLARPALYAAWHEVLPLHAGGSRKPEKAQTLAG
PVCETGDILATDRVLPPLSRDDLLAILDAGAYGAVMSSTYNARPLAAQIMIEDGKIAEIR
QRQTLESLWEAERLPDWFKAE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatttaccgccgtctcttgtggagatactgcaatcacgcccttggctccgttat
gatactgacgcggcgcttatctttgacggcgtccgcctgcaagatattgccgcgcaatat
gacacaccatgctgggtcttcagcgcttccattctgcgggcgcgggcgcgggcgctcaag
gcggctttcagcggcataaatcagcccatctccatgcattacgccgtcaaggcaaatgac
caccgtgcgactctcgccatccttcagcgtgaggggttcggtgccgacgtcgtcagtggg
ggcgaattacgcaaagccatcgcggcgggcatagtcccctttgacatcgtgttttccggc
gtgggcaaaaaagatgcggagctgaccctcgccattgaaacggaaattggcgtcatcaat
gtggaaagccgtgaggagcttggtcgcctcacctcactggcaacgcgccttggcaaacgc
ccgaaagtcgctttgcgcgtcaacccgcatatcgatgccgggacgcatgataaaatcagc
accgggcgggagggggataagttcgggattgactggcgtgaagcccctaccttgagccgc
atggccgccagggacccgcacttggatttcatcggtctcgcggcgcatattggcagccag
atcacatccatcgcaccttttgaagccgcatgtcagagactggccgggatgatcacggac
ctgcgggcggacggcatcgcggtgaaacatgtcgattgtggcggtgggctgggcatatgc
taccatcaggaggccccgcccgatatcaccgagtacgcccgggtgattgcaaaccacctc
ggcacgttgaatgtcgcgatctcgatcgagcccgggcggtggctcagcggcccgacaggc
attcttctcacccgcgtgatcgacgttaaagcccaacccgccccgaggagcgacttcgtg
tttatcgacgccgcaatgaacgacctcgcccgcccggctttatacgcagcatggcacgaa
gtccttcccctccatgcgggcggctcccggaagccggaaaaagcccagaccctggcgggg
cctgtttgtgagacaggcgacattcttgcgacggatcgcgtcctgccacctctatcccga
gatgacctgctggcgatattggatgcaggcgcctatggggccgttatgagctcaacctat
aatgcccgccctctcgccgcgcagatcatgattgaggacgggaaaatcgctgaaattcgt
caacgccagactctcgaaagcctttgggaggcggagcgtctgcctgattggttcaaggct
gaatga
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