Candidatus Kirkpatrickella diaphorinae: N5W20_04730
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Entry
N5W20_04730 CDS
T09554
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N5W20_04730 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kdp03400
]
N5W20_04730 (uvrB)
DNA repair and recombination proteins [BR:
kdp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N5W20_04730 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
N5W20_04730 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
AAA_5
SWI2_SNF2
WH4_Lhr
Kinesin
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
UYH52241
LinkDB
All DBs
Position
complement(1054060..1056177)
Genome browser
AA seq
705 aa
AA seq
DB search
MAVQSDFSPSGDQPTAIETLVAGVRENARDQVLLGVTGSGKTFTMAKVIEATQKPTLILA
PNKTLAAQLYGEMKQFFPENAVEYFVSYYDYYQPEAYVPRSDTYIEKDSQINEQIDRMRH
AATQALLERNDVIIVASVSCIYGIGSVETYSRMVVRLETGGSIDRDRLIKALVELQYRRN
DAAFERGTFRVRGEQVDIFPVQNEDRAWRVTLFGDEIDEIIEFDPLTGAKTADLSEISIY
ANSHYVTPRPTLNQAIIGIKDELRARLAQLTAEGKLLEAERLAQRTQFDLEMIETTGVCK
GIENYSRYLSGRGPGDPPPTLFEYLPEDALLIVDESHVTVPQIGGMSRGDHARKSVLSEY
GFRLPSCLDNRPLHFHEWDSLRPQSIFVSATPGPWELDQTQGIFAEQVIRPTGLTDPITI
IRPVEGQVDDLLGEAKATIREGGRVLVTTLTKRMAEDLTEYLTENSMRVRYLHSEVDTLE
RIEIIRDLRLGAFDILVGINLLREGLDIPECSLVAILDADKEGFLRSRTSLVQTIGRAAR
NVDGRVILYADNMTGSLQYAVDETARRRARQTAWNEAHNITPQTVRSRIGEAMSSVFEQD
YVTVAADETQSHAEFVGKSLATSITELEKRMHAAAADLNFEEAARLRDEVKRLEAIELGM
EPPPIARSTAGRGRKTGDKVRTPKPFGPGGGGYDPHKQRSRRGKK
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagtccgatttttcaccctcaggtgatcagccgaccgccattgagaccctt
gttgccggggtgcgggaaaatgcgcgggatcaggttctgctgggcgtcaccgggtccggc
aagaccttcacaatggcgaaagtgattgaggccacccagaagccaaccctcatccttgcg
cccaataagacgctcgccgcccagctttacggggagatgaagcaattcttccccgaaaat
gcggttgagtattttgtgtcctattacgattattatcagcctgaggcttatgtcccgcgc
tcggacacctatatcgagaaagacagccagatcaacgagcagattgaccggatgcgccac
gcggccactcaagcgctgctggagcgcaatgatgtcatcattgtcgcttccgtctcgtgc
atttatggtatcggctcggttgaaacctattcccgcatggtggtgcggcttgagacaggt
ggctcgattgatcgtgaccgcctgatcaaagcgcttgttgagcttcaatatcggcgaaat
gatgcggcctttgagcgtggcaccttccgcgtgcggggggagcaggtggatatcttcccc
gtgcagaatgaggatcgcgcctggcgggtgacgcttttcggtgatgagattgacgagatc
atcgagttcgaccctttaaccggtgctaaaacggcggatctatcggaaatcagcatttat
gcgaattctcactatgtcacgccgcgccccaccctcaaccaggccattatcggcatcaag
gatgagctgcgcgcgcgcctggcgcaattgacggcggagggcaagcttctggaagcggaa
cgcctcgcccagcgcacacaatttgatcttgagatgattgagacgaccggcgtgtgcaaa
gggatcgagaattactcacgttacctgtccggacgcggcccgggcgaccccccgccgacg
ctgtttgaatatctgccggaagacgctcttctgatcgtcgatgaaagccatgtgaccgtg
ccgcagattgggggcatgtcgcgcggtgaccatgcgcggaagtcggttttgtcggaatat
ggtttccgtctgccatcctgtcttgataaccggcccctgcattttcatgaatgggacagt
ctgcgcccgcaatcaattttcgtctccgcgacgcccggcccctgggagctggatcagact
caggggatttttgcggaacaggtcattcgacccacaggtttgaccgacccgattacgatc
atccgcccggtagaaggccaggtggatgacctcctcggtgaggcgaaagcgacgatcagg
gagggggggcgcgtgcttgtcaccactctgacaaagcgcatggcggaggacctgacggaa
tacctcactgaaaatagcatgcgggtgcgctacctgcactctgaggtcgatacgcttgag
cgcattgagatcatccgtgacctgcgcctcggtgcttttgacattttggttggaatcaat
cttttgcgggaagggctggatataccagaatgctcccttgtcgcgatcctcgatgcggat
aaggaaggtttcctgcgcagccgtacctcgctggtgcagacaatcgggcgagccgcccgc
aatgttgatgggcgggtcattctctacgctgataatatgaccggctccctgcaatatgcc
gttgatgaaacagcccgccgtcgcgcgcgccagacagcgtggaatgaggcgcataacatc
accccgcagacagtgcgctcacgcattggggaggcgatgtcttccgtctttgagcaggat
tacgtcactgtcgcggcggatgaaacacagagccatgcggaattcgtcggcaaatccctc
gcgacctccattactgagctggaaaagcgcatgcacgcagcggccgccgaccttaatttt
gaagaagccgcgcgcctgcgggatgaagtcaaacgccttgaagccattgaattgggcatg
gagccaccccccatcgcccgttccacagcgggcagggggcgcaaaaccggggataaagtc
cgcacgccgaagcctttcggacctggcgggggcggttatgacccgcataaacaacgatca
cgacgtgggaaaaaataa
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