Candidatus Kirkpatrickella diaphorinae: N5W20_04790
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Entry
N5W20_04790 CDS
T09554
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kdp03016
]
N5W20_04790
Enzymes [BR:
kdp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
N5W20_04790
Transfer RNA biogenesis [BR:
kdp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N5W20_04790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
DNA_pol_B_2
Motif
Other DBs
NCBI-ProteinID:
UYH52171
LinkDB
All DBs
Position
1074335..1074985
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AA seq
216 aa
AA seq
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MASSPQAQPLLHDGDLPSGLDFGAVVAIDTEAMGLNPHRDRLCLVQLSAGDGTAHLVQIR
PPRPDGGYADCPNLKALLTDPQTTKLMHFARFDVALLQHALKIDVTPIICTKIAARLVRT
FTDRHGLAHLCRELLGIELLKQQQTSDWGAEILNKEQLAYAASDVLYLHALWAKLKALLE
REDRMALAQACFDFLPTRAKLDILGYTDPDIFSHRA
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcttccagcccgcaagcccaacccctcctccatgatggagacctgccatccggcctt
gatttcggcgctgttgtcgcgatcgatacggaagccatggggctcaacccgcatcgagac
cggctttgccttgtgcagctttccgccggtgatggcacggcgcatcttgtgcagatcaga
ccgccccggcccgatggaggctacgcggattgccccaatctcaaagcgctgctgacagac
ccgcaaacgacgaagctcatgcattttgcgcgtttcgatgtcgccctcctgcaacatgcc
ctcaaaattgacgtgacgcccatcatttgcacgaaaatcgccgcgcgcctcgtgcgcact
ttcaccgatcgtcacggcctggcgcatttatgccgggagcttctgggcattgagttattg
aagcaacaacagacgtccgactggggcgccgaaattctcaataaagagcaattggcttac
gcggcctccgatgtcctctatcttcacgctttgtgggcgaagctcaaggcccttctggag
cgggaagaccgcatggcgcttgcccaggcctgtttcgatttcctcccgacacgggcgaag
ctggacatattaggttacacggaccctgacatattctcccaccgcgcttga
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