Candidatus Kirkpatrickella diaphorinae: N5W20_05955
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Entry
N5W20_05955 CDS
T09554
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kdp03016
]
N5W20_05955 (truB)
Enzymes [BR:
kdp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
N5W20_05955 (truB)
Transfer RNA biogenesis [BR:
kdp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
N5W20_05955 (truB)
Prokaryotic type
N5W20_05955 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
UYH50665
UniProt:
A0ABY6GII5
LinkDB
All DBs
Position
complement(1341458..1342399)
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AA seq
313 aa
AA seq
DB search
MGRKKGRPVNGWLIIDKPLHIGSTDVVNKMRRLFNARKVGHAGTLDPLASGILPIAFGQA
TRTIPYIMEATKRYQFTLEFGASRTTDDKEGEVLETSDHRPDDAAIRAVLPRFTGEIMQI
PPIYSALKLGGARAYELARKGEVPEMQPRPARIDSVTLTERSDADHAVFNVQSGKGVYMR
ALARDIARACGTVGHIASLRREKCGPFDVSNAITLDKLLQNSEKASTLDGFLLPLATALD
DIPALAVTEGEAQALKWGQTLPALHISAEIEADLLRAEFQGDVIGLCRVSEGRLRPVRIF
DLTNDGVDDVDYS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtaaaaaggggcggccggtcaatggctggctgattatcgacaagccgcttcat
atcggctcaaccgatgttgtcaataaaatgcgccgtctttttaacgcgcgcaaagtcggc
catgccggtacgcttgacccgcttgcttccggcattctgcccatcgctttcggccaggcc
acccgcaccattccgtatatcatggaagcgacaaaacgctatcagttcacgctggagttc
ggcgcgtcccgcacgacggatgacaaggagggggaggttctggaaacttccgaccaccgg
cccgatgacgcggcaattcgcgcggttcttccacgttttaccggcgagatcatgcagatc
ccgcctatttactcggccctcaagcttgggggtgcccgcgcctatgagctggcccgtaag
ggggaagtgcctgagatgcagccccgcccggcccggatcgacagcgtcaccctgacggaa
aggtcggatgctgatcatgctgtttttaacgtccagtcaggtaaaggcgtctatatgcgg
gctttggcacgggatattgcgcgtgcctgcgggacagtcgggcatattgcgtcactcagg
cgagaaaaatgtggcccgtttgatgtttcaaacgcaataacactagacaaactgttgcaa
aatagcgagaaagcttcaactctggatggatttctccttccgttagcgaccgcgctggac
gacatcccggctctggccgtgacagaaggggaggcccaggcactcaaatggggtcagacg
ctcccggctctgcatataagcgcagaaatcgaggcggatctcctccgtgcggaattccag
ggtgacgtcattggtctttgtcgcgtctcggaagggcgcctcaggccggtgaggattttt
gacctgacaaatgatggagttgacgatgtcgattacagctga
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