Candidatus Kirkpatrickella diaphorinae: N5W20_06530
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Entry
N5W20_06530 CDS
T09554
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kdp03400
]
N5W20_06530 (addB)
Enzymes [BR:
kdp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N5W20_06530 (addB)
DNA repair and recombination proteins [BR:
kdp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
N5W20_06530 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UYH50769
UniProt:
A0ABY6GHJ1
LinkDB
All DBs
Position
complement(1478192..1481221)
Genome browser
AA seq
1009 aa
AA seq
DB search
MSVVAVAASDSFFDVVASQWQRIMEGAAHQAADGVIIVPNRRAAMQVSEAFLRLCDGEAM
LLPRIVPFSELEKIMEFTLRPQYVSASGADTGLRSALDALLTLPPACDKMQRLAALSSLV
LRSGDAFAVRPGLDQAWSLAQALADLMDDAERAEIDLAARLPEADDGEFAAHWQRCLDFL
AIVTAFWPEYLTEGGVTNPVARQNHVVKVMMAAWEAAQPTLPIWAVGFTDIASSVGMLLS
TVANLPGGCVVLPGLDQELEDALWAALPESHPQSGLKAILDAMGVERGALPRWSQGFPWV
DPIPAGRVAMLRAALTPAAGVAQWMRDPQPCDLTGLSSLNCEDPQQEARAIAMILRAALE
KPGHRVALITPDRQIARRVSVELLRFGIVADDSAGEALALTPSAVFIRLLAEAVASELAP
VPLLALLKHPLSACGMTQGACRASARKLERMVLRGPAPPPGFAGLRLRCRDEGDGEAELA
DRPDQPVAPEDFINRLEKILDPLLTCGDAPLPTLLTRLVKVAEALASTPETEGADRLWFG
EAGHALAEHLSGLMQFTELLGAQGFATLPAFLAASMQGQSVMGQHILRGREGGALHPRVY
ILGLIEARLQRFDLAVLAGLEEQIWPRIAEPSPWLSRPMRLKIGLPAPEHDIGASAFDFV
SGMCSASHIVLSHVARRENAPSVPSRWLVRMHAYLEGRGQSLPQHPARAWQMQIDQPAGP
TTSAAQPAPRPPVPLRPRRLSVTEIDTWLRDPYTIYARHILKLRPLDAINAPPGRADIGV
IVHEALAEWLQGHKRDVGHLTRLLHERLARSPMRPAMRAWWRGRFSLIATEIVAFEAGRA
FHPAQSWGEAAGKLRLDAPQGGFDLTARADRIDRDGLGQICVIDYKTGQPPKRKDADLGW
ASQLWLEAAMILRGAFDGITAESFTSLEYWRVSGNAASDRVVIIAEGSEGDIAEEAENRV
RRLEEWVAQYDDPDMPYIAQPYPEYAPRFDDYGHLARVKEWRISAEADE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggtcgcggtcgcggcttctgacagtttttttgacgtcgtcgccagtcaatgg
caacgcatcatggaaggggcggcgcatcaggcggctgacggcgtcatcatcgtcccgaat
cgtcgcgccgccatgcaggtctcggaagctttcctgcggttatgtgatggcgaggccatg
ttgctgccgcggatcgtcccgttttccgaacttgagaaaatcatggagttcacgctccgc
ccgcaatatgtgtcggcatccggcgctgacacaggattgaggtccgcccttgacgcgctt
ctgaccctgccgcccgcatgtgataaaatgcagcgtctggccgcgttatcttcattggtt
ttaaggtcaggcgatgcatttgcggtgcgtccggggctggatcaggcatggagcctcgcc
caggcgctcgcggatctcatggatgatgcggagcgcgcggaaattgacctcgccgcgcga
ttgccggaggcggatgatggtgaattcgccgcgcactggcagcgctgccttgatttcctc
gcaatcgttacggcgttctggccggaatatctgacggaggggggcgtcaccaatccggtg
gcacgccaaaatcacgtcgtcaaagtgatgatggccgcatgggaagcggcgcagcccact
ttgccgatctgggctgtcgggtttacggatattgcaagttccgtcgggatgttgctctcg
acggtcgccaacctgcctggcggttgcgtggtgctgccggggctggatcaggaattggag
gatgcgctctgggcggctctccctgaaagccacccgcaatccggcttaaaggcgattttg
gacgcgatgggggtggagagaggggctcttccccgctggtcacagggctttccgtgggtt
gacccgatcccggcaggccgggttgccatgttgcgcgccgccctgacgcccgcagccggt
gtagcgcaatggatgcgtgacccgcaaccctgtgatctgaccggtttatcgagcctgaat
tgtgaagacccgcagcaggaagcccgcgccattgccatgatcctgcgtgcggcgttggag
aaaccgggccatcgtgtggccctgatcacgccagaccgccagatcgcccgacgtgtttcc
gtcgagctgctgcgcttcggcattgtcgcggatgatagtgcgggtgaagcgcttgctttg
acgccttcagccgttttcatccgcctgcttgctgaagctgtcgcgtcggaactcgcgccc
gtcccgctcctggcgctgctgaaacacccgctttcagcctgtgggatgacgcagggcgcc
tgccgcgcaagcgcccgcaaattggagcgcatggtcctccgcggtcccgccccgccaccg
ggttttgcagggctgcgcctgcgctgccgcgatgagggcgatggggaagccgaattggcg
gatcggcccgatcaacccgttgcgcctgaggacttcatcaatcgcctagagaaaatcctc
gatccgcttctgacatgcggggatgcgccgctcccgaccttgctgacgcgattggtcaag
gtcgcggaggctttggccagcacgccggagacggaaggggcggaccgtttatggttcggg
gaggcggggcacgctttggctgagcatctttccggcctcatgcaatttaccgaactgctc
ggggcgcagggttttgcgaccctgcccgcctttctggcggcttccatgcaggggcaatcc
gtgatgggccagcatattctgcgcgggcgcgaggggggcgctttgcatccgcgtgtctat
attcttggcctcattgaagcgcggcttcaacgatttgacctcgccgttctggccgggctg
gaagagcagatctggccccgcatcgctgagccgagcccgtggttgagtcgacccatgcgc
ctcaaaatcggcctgcccgcgccggaacatgatattggcgcaagtgcattcgatttcgtg
tcagggatgtgcagcgcgtcccatatcgtcctgtcccatgttgcgcggcgtgaaaatgca
ccttccgtgccgtctcgatggctggtgcgcatgcacgcttacctggaaggtcgtggccag
tccctgccgcaacatcccgcgcgcgcgtggcaaatgcagatcgatcagcctgcggggccg
acgacgtccgccgcgcaacctgcgccgcgcccacccgtgccgcttcgtccccgccgcctc
agcgtcacggaaatcgatacgtggctgcgtgacccttacaccatctatgcgcgacatatc
ctcaaactgcgcccccttgatgcgatcaacgccccgccggggcgggccgatatcggtgtc
attgtgcatgaggcgctcgcggaatggcttcagggccacaagcgggatgtcggccatctg
acgcgcctgctgcatgagagattggcgcgatcaccgatgcggcctgccatgcgggcctgg
tggcgcggccgcttcagcctgattgcgacagaaatcgtggcgtttgaggcgggacgggcc
tttcacccggcgcaatcctggggggaagccgcaggcaagttgcgtctggacgcgccgcag
ggcggatttgatctgacagcgcgtgcggatcgtattgatcgtgacgggttggggcagatc
tgcgtgattgattataagacgggtcaaccgccgaaacgtaaggatgcggatttaggctgg
gcttcgcaactctggctggaagcggcgatgatcctgcgtggtgcctttgacggcatcacc
gcggagagtttcacctcgttggaatattggcgcgtctcaggcaatgcggcgtcagatcgc
gtcgtcatcattgccgaagggtcggagggcgacattgccgaagaagccgagaatcgcgtg
cggcggcttgaagagtgggtggcgcaatatgacgacccggacatgccttatatcgcgcaa
ccttatccggaatatgcgccgcgttttgatgattacggccatctggcccgcgtcaaggag
tggcggatcagcgcggaggcagatgaatga
DBGET
integrated database retrieval system
