Candidatus Kirkpatrickella diaphorinae: N5W20_07565
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Entry
N5W20_07565 CDS
T09554
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N5W20_07565 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kdp03021
]
N5W20_07565 (rho)
03019 Messenger RNA biogenesis [BR:
kdp03019
]
N5W20_07565 (rho)
Transcription machinery [BR:
kdp03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
N5W20_07565 (rho)
Messenger RNA biogenesis [BR:
kdp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N5W20_07565 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
AAA_22
AAA
S1CSD-TOTE-2
NACHT
Fungal_virus_P2_C
Spore_III_AA
ResIII
Motif
Other DBs
NCBI-ProteinID:
UYH50948
UniProt:
A0ABY6GJC7
LinkDB
All DBs
Position
complement(1707372..1708679)
Genome browser
AA seq
435 aa
AA seq
DB search
MHLAELKKKSPADLLADAEELQIENASSMRKQDIIFAILKTLADNDQAIFGEGTLEILPD
GFGFLRSPEANYLPGPDDIYISPTQVRRYGLRGGDTVEGQIRAPRDGERYFSLIKVNAIN
FESPDSVRQRINFDNLTPLFPTQPLKMESEHVGAVETNGSGNGNGKGKKDQRDFTSRVID
LVSPIGKGQRALIVAPPRTGKTVMLQSIAASISANHPEVFLIVLLIDERPEEVTDMARSV
RGEVVSSTFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSGK
VLTGGVDANALQRPKRFFGAARNVEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEL
ILDRKLADKRTFPAIDITKSGTRKEELLVDRSALSKMWVLRRVLAPMGTMDAMEFLLDKL
KYSKNNGDFFEAMNN
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttgctgaacttaaaaagaaatcaccagccgaccttttagccgatgctgaagaa
cttcagatcgagaacgcctcgtccatgcgaaagcaggacattatcttcgccattctgaag
actttggcggataatgatcaggcaattttcggtgaagggacgctcgaaattcttcccgac
ggtttcgggtttctgcgatctcccgaggcaaattaccttccgggccctgatgatatctat
atctcgccgacccaggtgcgccgttacggtctgcgcggcggggacacggttgagggtcag
attcgcgcaccacgggatggtgagcgttatttctcgctcattaaagtcaatgcgatcaat
tttgaaagtcctgactccgtccgtcagcggatcaacttcgataatctgacgccgcttttc
ccgacccagcccctcaaaatggagtctgagcatgtcggtgcggtggaaacgaacggcagc
ggcaacggaaatggcaagggcaagaaggaccagcgcgattttacctcgcgcgtgatcgac
cttgtctcaccgatcggtaaaggtcagcgcgcgcttatcgtcgcgccgccgcgcacgggt
aagacggtgatgctgcaaagcatcgcggcgtccatctccgccaatcatccggaagtgttc
ctcatcgttcttctgattgatgagcgtccggaggaagtgacggatatggcccgctccgta
cggggtgaggttgtctcctccacttttgatgagcccgcgacgcgacatgtgcaggtgacg
gaaatggtgcttgagaaagccaagcgcctcgttgagcataagcgcgacgttgtcattctg
ctcgattccatcacccgtttggcgcgtgcctataatacggtcgtgccctcatcaggtaag
gtgctgacaggtggtgtcgatgccaacgcccttcagcggcccaaacgtttcttcggcgcc
gcccgtaatgttgaggagggcggatccctgaccatcatcgcgaccgctctgatcgatacg
ggaagccgcatggacgaggtcatttttgaggaattcaagggcacgggtaactccgagctt
atccttgatcgcaaactggccgataagcgcaccttcccggcgattgacatcacaaagtca
ggcacacgtaaggaagagttgcttgtggaccgctctgcattgtcgaaaatgtgggtgctc
cgccgtgtccttgccccgatgggcacaatggacgctatggaattcctgctcgacaagctc
aaatatagtaaaaataacggtgacttcttcgaggcgatgaataactga
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