Candidatus Kirkpatrickella diaphorinae: N5W20_08835
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Entry
N5W20_08835 CDS
T09554
Name
(GenBank) type III PLP-dependent enzyme
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
kdp
Candidatus Kirkpatrickella diaphorinae
Pathway
kdp00330
Arginine and proline metabolism
kdp00480
Glutathione metabolism
kdp01100
Metabolic pathways
kdp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
kdp00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
N5W20_08835
09106 Metabolism of other amino acids
00480 Glutathione metabolism
N5W20_08835
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
N5W20_08835
Enzymes [BR:
kdp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
N5W20_08835
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
YIEGIA_cap
Motif
Other DBs
NCBI-ProteinID:
UYH51178
LinkDB
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Position
2003830..2004963
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AA seq
377 aa
AA seq
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MTPKLKMFFSEGALPTPYLAVDLDRVAKQYRRMVKAMPWAKVFYAVKANPAAPILKTLVR
AKAGFDAASIEEVRQCLAAGCAPSDISYGNPIKKSASIAEAASLGVRLFVCDSEEELQKI
AQHAPGAKIYTRLGVDNEGADWPLSQKFGASASTCASLLRKASDLGLIPYGVSFHVGSQQ
GSPAAYIDAIHQAARIFQDVAAHGIKLTMLNIGGGFPVQYRAPVPEIERFASEIDAALTT
AFGAARPFIMSEPGRYLVAEAGIVCSEVVLNARRELPGQEGDWLYLDIGRFGGLAETEDE
AIRYDIVSLRQQAPQRPFVLAGPTCDGVDILYRKNKVSLPSDLKEGDRVALLAAGAYVST
YSSQGFNGFAPLSEHYI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgacccccaaattgaaaatgtttttctcggaaggtgccttgccaacaccttatctcgcc
gtcgacctcgaccgtgtcgccaagcaatatcggcggatggttaaagcgatgccgtgggcg
aaagttttttacgcggtcaaagccaaccctgccgcgccaatcctgaaaacactggtgcgc
gccaaagcgggttttgacgcggcctcgattgaggaagtgcgccaatgcctggcggctgga
tgtgcgccatcggatatttcctacggtaacccgatcaaaaaatccgcatctatcgcagag
gccgcgtccctcggtgttaggctgttcgtttgcgatagtgaggaggaacttcagaaaatc
gcgcaacatgcaccgggggcgaaaatctacacgcgtctcggggttgataatgagggcgcg
gattggcccctttcacagaaattcggggcctctgcatcgacctgtgcttctctgttgcgc
aaagcctcggatctgggactcatcccctatggcgtgtcgtttcatgttggaagtcagcag
ggctcccccgctgcctatattgacgcgatccaccaggccgcgcgtatttttcaagatgtc
gcggcgcatggcatcaaactgaccatgctgaatattggcggcggtttccccgttcaatat
cgcgccccggtgccggaaattgagcgtttcgcctcagagattgatgcggctttaacgaca
gcgttcggcgcggcgcggcccttcatcatgtcggagccgggtcgttacctcgtcgctgaa
gccgggatcgtgtgcagtgaagtcgtgctgaatgcgcggcgggagcttccggggcaggag
ggggactggctctatctcgatatcggccgcttcggtggtctggcggaaacggaggatgag
gccatccgctacgacatcgtgtccctccggcagcaggcgccgcaacgcccttttgtcctt
gccggaccgacgtgtgatggggtggatatactttatcggaaaaataaagtgtccctgccg
tcagatttgaaagaaggcgaccgtgtagcgcttctcgccgctggcgcttatgtttcgacc
tattcgtctcagggttttaacggcttcgcacccctttccgaacattatatttga
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