Kroppenstedtia eburnea: GXN75_01240
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Entry
GXN75_01240 CDS
T06618
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
keb
Kroppenstedtia eburnea
Pathway
keb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
keb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GXN75_01240 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
keb03021
]
GXN75_01240 (rpoC)
03400 DNA repair and recombination proteins [BR:
keb03400
]
GXN75_01240 (rpoC)
Enzymes [BR:
keb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GXN75_01240 (rpoC)
Transcription machinery [BR:
keb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GXN75_01240 (rpoC)
DNA repair and recombination proteins [BR:
keb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GXN75_01240 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Motif
Other DBs
NCBI-ProteinID:
QKI80749
LinkDB
All DBs
Position
227286..230909
Genome browser
AA seq
1207 aa
AA seq
DB search
MLDVNNFEYMKIGLASPNKIRSWSRGEVKKPETINYRTLKPEKEGLFCEKIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRSKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRSLEEVIYFASYVVVDPGATPLEKKQLLSEKEYRNYREKYGNAFTAMMGAEAIKRLLA
EIDLNKEVQALKEEMHTAQGQRRSRAIKRLEVLEAFRASGNQPDWMVLDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDSLIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVSKGLAHNIKSAKRKVERIHPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPILVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGCYYLTLEKAGAPGEGRVFTGPGEAINAYTQGVVSLHTRIAVP
VKSLNKESFSEKQQEAKLLTTVGKLIFNEIFPTNFPYINEPSKANLVDGTPEKYFVYEKG
VNIREKIKSMPEQEALKKGFLGTLIAESFRRFGTKETSVLMDNMKSLGYSFSTKAGITMS
VSDVVVPEQKQKILDEAEEKVGMVLKQYRRGLITEDERYERVIQIWSQAKDDITDVLMNK
LGKFNPIYMMANSGARGNVSQITQLAGMRGLMANPAGRIIELPIKSNFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREDDCGTDKGLEVSKIADGGEVIEEM
YDRIVGRMAFETVRHPETGEILARRNELIDEEKAGRIVEAGVEKVVIRSVLSCRTQHGVC
RMCYGRNLALGTHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQAIITEIAGTVKEIREVKDRREIEVEGDVETKTYQIPYGSRLKVSEGDRVEA
GDELTEGSVDPKELLRVKGVRGVQEYILQEVQKVYRLQGVEINDKHVEVMIRQMMRKVRI
TDSGDTDLLPGSFVDLHDYEEANRKVFLEGREPAVARPILLGITKASLETESFLSAASFQ
ETTRVLTDAAIKGKVDRLLGLKENVIIGKLVPAGTGMARYRNLAVDGEHESSTAESTGTA
DDKVLVE
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
gtgctggacgtcaacaacttcgagtatatgaaaatcggtctcgcctcgccgaataaaatc
cgctcctggtcccggggcgaagtgaaaaaaccggagacgatcaactaccggaccctgaag
ccggagaaggaaggccttttctgcgaaaagatcttcggccccaccaaggactgggaatgt
cattgcggaaagtataaacgtgtccgttacaaaggggttgtctgtgaccgttgcggtgtc
gaggtgacacggtccaaagtgcggcgggagcggatggggcatatcgaactggccgctccg
gtgtcccacatttggtacttcaaggggatccccagccggatgggattggttctggacatg
tcgccccgttccctggaggaagtgatctattttgcttcctacgtggtggtggaccccggc
gccacaccgctggagaagaaacagctcctgtcagaaaaagagtaccgcaactaccgggaa
aaatacggaaatgccttcaccgcgatgatgggggcggaagcgatcaagcgactgcttgcc
gagatcgacctcaacaaggaagtgcaggccctgaaagaggagatgcacacggcccagggg
cagcgccgcagccgggcgatcaagcggctggaagtgttggaggctttccgtgcctccggc
aaccaaccggattggatggtgctggatgtactgcccgtcatcccgccggaactgcgtccg
atggtgcaactggacggggggcgttttgccacatccgacctgaatgatctgtaccgtcgg
gtgatcaaccggaacaaccggctgaaacggcttctcgacctgggcgcccctgacatcatc
gtgcaaaacgagaagcggatgctgcaggaggccgtcgactccctgatcgacaacggacgt
cgcggtcgtccggtcaccggaccgggaaaccgcccgctcaagtccctttcccacatgctg
aaaggaaagcaaggccgtttccgccaaaacctgctggggaaacgggtggactactccggt
cgttctgtgatcgtcgtcggtcccaatctgaagatgtaccagtgcggactgcccaaggag
atggccctggagctgttcaagccctttgtgatgaaggagttggtctccaaggggctggcc
cacaatatcaaaagtgccaagcggaaagtggaacggattcatcccgaagtgtgggatgtg
ttggaagaggtcatcaaggaacacccggtgctcctgaaccgggcgccgacgttgcaccgg
ctgggcattcaggcttttgagccgatcttggtggaagggcgggccatccggttgcatccc
ctggtctgtaccgcctacaatgccgactttgacggggatcagatggctgttcacgtaccg
ctgtccgcggaagcccaggcggaagcgcgcctgctgatgctggccgcccagaacatcctc
aacccgaaagacgggaagcctgtggtcacgccttcccaggacatggtgctgggatgttat
tacctgactctggagaaagcgggagcgcctggggaaggaagggtgttcaccggaccgggg
gaggcgatcaacgcctacacccagggagttgtcagcctccacacccggatcgccgttccg
gtgaagagcctgaacaaagaaagcttttccgaaaagcagcaggaagcgaaactgttgacc
acagtgggcaagttgattttcaacgagatcttccccacaaattttccctatatcaatgag
ccctccaaggccaacttggtggacgggacaccggagaagtatttcgtttatgaaaaaggg
gtcaacatccgggagaaaatcaagagtatgcctgagcaggaggccctcaaaaaagggttc
ctgggcactctgatcgccgaaagcttccgccgtttcggcaccaaggaaacctcggtgctc
atggataacatgaaatccctgggttactccttctccaccaaggccgggatcaccatgtcc
gtctccgatgtggtcgttcccgaacagaaacaaaagatcctggacgaggcggaagagaag
gtggggatggtcctcaaacagtaccgtcgcggtctgatcaccgaagacgagcgctatgag
cgggtcatccagatctggagccaggccaaggatgatatcaccgatgtgctgatgaataaa
ctgggtaaattcaacccgatttacatgatggccaactccggtgcccgggggaacgtctcc
cagatcacccagttggccgggatgcgcggattgatggccaacccggcgggacggatcatc
gagttgcccatcaagtccaacttccgtgaagggctgaccgtgctggaatacttcatctcc
acccacggggcccggaaaggtttggccgacacggctttgcggactgccgactccggttat
ctcacccgccgcctggtggatgtggcccaggatgtgattgtccgggaggatgattgcggc
accgacaaagggctggaagtcagcaagatcgccgacggcggtgaagtgatcgaggagatg
tatgaccggattgtgggtcgcatggcttttgaaaccgttcgtcatccggagacgggcgag
attttggcccgccgcaacgagctgatcgatgaggaaaaagcgggccggatcgtggaggcc
ggtgtggagaaagtggtcatccgctccgtcctcagctgccgcacccaacacggggtttgc
cggatgtgttacggtcgcaacctcgccctgggcacccatgtggagatcggggaagcggtg
ggcatcatcgcagcccagtccatcggggagcccggaacccagttgaccatgcggaccttc
cacaccggcggtgtggccggtgatgatatcacccagggtctgccccggattcaggagctg
tttgaggcccggaatcccaaagggcaagccatcattaccgagatcgccgggacggtgaaa
gagatccgcgaggtgaaggatcgccgggagatcgaggtggagggagacgtggagaccaag
acctatcaaattccctatggctcccggctgaaggtgagcgaaggggaccgggtggaagcc
ggtgacgagctgaccgaaggctccgttgaccccaaggagttgctccgggtaaaaggggtt
cgcggcgtgcaggagtatatcctccaggaagtgcaaaaggtgtaccgcctgcagggggtg
gagatcaacgacaaacacgtcgaggtgatgatccgccagatgatgcgcaaagtacgcatc
accgattcgggagacaccgatctcttgcccggctcctttgtcgaccttcacgattatgaa
gaagccaaccggaaagtgtttcttgaaggtcgggaacccgccgtggcacggccgatcctg
ctcgggatcaccaaggcctctctggagacggaatccttcctgtcggcggcttccttccag
gagaccacccgcgtcctgaccgatgcggccatcaagggcaaggtggaccgtctcctcggt
ctcaaggagaatgtcatcatcgggaaactggtgccggcgggaacgggaatggcccgttac
cggaatctggcggtggatggggagcatgagtcctcaaccgccgaatcgacgggtaccgcg
gatgataaagtcttggtggaataa
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