Kroppenstedtia eburnea: GXN75_09395
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Entry
GXN75_09395 CDS
T06618
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
keb
Kroppenstedtia eburnea
Pathway
keb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
keb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GXN75_09395 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
keb03019
]
GXN75_09395 (rny)
Messenger RNA biogenesis [BR:
keb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GXN75_09395 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
ATP-synt_B
KH_2
Sirohm_synth_M
Motif
Other DBs
NCBI-ProteinID:
QKI83734
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Position
complement(1919361..1920974)
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AA seq
537 aa
AA seq
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MQQTEADRSCFILGEGRRWVAIEATDFLVWLLLFLLVIGLGTAIGYRMRRLTAEARIGSA
EKEAEQIIDKARSDAEALKRENILEAKDEVHRLRTEAEREIREQRNDLARLERRLMQKEE
TLDRKQESQEKREETLSEREDAIRDREEKIDRLYRDQVAELERLSGLSTDEAKQLILSKV
ENEMKHETTQMIKEMEQQAQEEADKRARSILSLAIQRCAADHVAETTVSVVTLPNDEMKG
RIIGREGRNIRALETLTGIDLIIDDTPEAVILSGFDPIRREVARVALEKLVADGRIHPAR
IEEMVEKSRKEVDERIREYGEQATFETGVHGLHPDLIKILGRLKFRTSYGQNVLQHSMEV
AHLAGLLAAELGEDVHLAKRAGLLHDIGKAIDHEVEGSHVEIGIELGKKYNEHPAVINGI
ASHHGDVEATSVIAVLVGAADALSAARPGARRETLEAYIKRLEKLEEICESFDGVEKSYA
IQAGREVRIMVRPDEINDGESTRLAREIKKEIENKLDYPGHIKVTVIRETRAVEYAK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagaccgaagcggatcggtcttgttttatacttggggaagggaggaggtgggta
gcgatcgaggcgactgattttctcgtgtggttactcctgttcctcctcgtaatcggtctg
ggtacggccatcgggtaccggatgcggagattgacagcggaagcccggatcggcagtgcc
gaaaaagaggcggaacagatcatcgataaagcgagaagcgatgcggaagcgttgaagcgg
gaaaatattctggaagccaaagatgaggtacaccgtctgcgcacggaagcggaacgggaa
attcgcgaacagcgcaacgacctggccaggctggaacgtcgtctgatgcagaaggaagag
accttggacaggaaacaggaaagccaggaaaagcgggaggaaactctcagcgaaagggaa
gatgccatccgggaccgggaagagaagatcgacaggctttaccgggaccaggtggcggaa
ttggaacgcttgtccggattgtccacggatgaagcgaagcaactgattctgtccaaagtg
gaaaatgagatgaagcatgagaccacgcaaatgatcaaggagatggagcaacaggctcag
gaagaagccgacaagcgggcccggagcattctctctctggccatccagcggtgtgctgcg
gatcatgtggcagagacgactgtatccgtggtgactctccccaacgatgagatgaagggg
agaatcatcggacgtgaaggtcgcaacatccgtgcattggaaacattgaccggaatcgat
ctgattatcgatgacacaccggaggccgtgattctttccggatttgatccgattcgaaga
gaagtggcccgtgtggcactggaaaagcttgtggccgatggcaggattcatccggcccgg
atcgaggagatggtggaaaagtcccgcaaagaagtggatgagcggatccgggagtatgga
gaacaggccacctttgagactggtgttcacggtctccatcctgatctgatcaaaattctg
ggccggttgaaattccggacgagctatggacaaaacgtgttgcaacactcgatggaagtg
gcgcatttggcaggtctgctggcggccgagctgggtgaggatgtccacctggcgaaacgg
gccggtctcctgcatgatatcgggaaagcgattgaccatgaagtggaaggttctcatgtg
gagatcgggattgaactgggtaaaaaatataatgagcacccggctgtcatcaacggaatt
gcatcccatcacggcgatgtggaggccaccagtgtgatcgcggttctggtcggtgcggcg
gatgccttgtcggcggcacggccgggcgcgcgacgtgagaccctggaggcgtatatcaag
cggttggagaagttggaggagatctgtgaatccttcgacggggttgaaaaatcttatgcc
atccaagccggccgtgaagtccggatcatggttcgtccggatgagatcaatgatggggag
tccacccggctggcccgggagattaaaaaagagattgagaataagctggactatccgggg
catatcaaagttacggtgatccgcgagacacgggctgtcgaatacgctaaataa
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